RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 IGF1P05019 195 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 GTF2F2P13984 249 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 RCC1P18754 421 aaPredicted RBP12.37□□□□□ -0.43
PDGFA-201ENST00000354513 PSMA1P25786 263 aaKnown RBP12.37□□□□□ -0.43
PDGFA-201ENST00000354513 IL3RAP26951 378 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 INSL4Q14641 139 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 ACSM3Q53FZ2 586 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 C9orf66Q5T8R8 295 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 UNQ9370/PRO34162Q6UXP9 181 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 OR5M8Q8NGP6 311 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 NEK7Q8TDX7 302 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 C4orf3Q8WVX3 66 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 RITA1Q96K30 269 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 KCTD7Q96MP8 289 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
PDGFA-201ENST00000354513 MRPS28Q9Y2Q9 187 aaKnown RBP12.37□□□□□ -0.43
PDGFA-201ENST00000354513 A0A1W2PPK0 400 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 TXNL1O43396 289 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 RAMP3O60896 148 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 ZNF780AO75290 641 aaPredicted RBP12.36□□□□□ -0.43
PDGFA-201ENST00000354513 TFAP2AP05549 437 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 CD36P16671 472 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 CNTFRP26992 372 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 MAPK3P27361 379 aaPredicted RBP12.36□□□□□ -0.43
PDGFA-201ENST00000354513 PPIFP30405 207 aaKnown RBP12.36□□□□□ -0.43
PDGFA-201ENST00000354513 FABP5Q01469 135 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 DCTN2Q13561 401 aaKnown RBP12.36□□□□□ -0.43
PDGFA-201ENST00000354513 RAB12Q6IQ22 244 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 GLIPR1L1Q6UWM5 242 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 CEACAM19Q7Z692 300 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 OR8H1Q8NGG4 311 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 THRSPQ92748 146 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 DERL3Q96Q80 235 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 RASL11BQ9BPW5 248 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 KLK15Q9H2R5 256 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 BANF2Q9H503 90 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 MBNL3Q9NUK0 354 aaKnown RBP12.36□□□□□ -0.43
PDGFA-201ENST00000354513 ETAA1Q9NY74 926 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 U3KQK5 164 aa12.36□□□□□ -0.43
PDGFA-201ENST00000354513 LYSTQ99698 3801 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 SEC14L6B5MCN3 397 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 LANCL1O43813 399 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 SLC2A2P11168 524 aaPredicted RBP12.35□□□□□ -0.43
PDGFA-201ENST00000354513 SOX6P35712 828 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 ALDH3B2P48448 385 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 TMEM30BQ3MIR4 351 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 TMEM91Q6ZNR0 172 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 PRR18Q8N4B5 295 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 OR13F1Q8NGS4 319 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 YIPF6Q96EC8 236 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 Q96M66 194 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 S100A13Q99584 98 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 GON7Q9BXV9 100 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 GNG12Q9UBI6 72 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 ZNF107Q9UII5 783 aaPredicted RBP12.35□□□□□ -0.43
PDGFA-201ENST00000354513 TRAPPC2LQ9UL33 140 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 RYR2Q92736 4967 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 STAB2Q8WWQ8 2551 aa12.35□□□□□ -0.43
PDGFA-201ENST00000354513 TRDV1A0A1B0GX56 115 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 MCRIP1C9JLW8 97 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 G3V318 75 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 I3L521 148 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 SPINT2O43291 252 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 IGLV1-40P01703 118 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 VDAC1P21796 283 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 GADD45AP24522 165 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 ECI1P42126 302 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 RPL5P46777 297 aaKnown RBP12.34□□□□□ -0.43
PDGFA-201ENST00000354513 GNB1P62873 340 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 MORN2Q502X0 79 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 C6orf183Q5T699 404 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 GPR141Q7Z602 305 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 OR52L2PQ8NGH6 319 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 MRPL30Q8TCC3 161 aaKnown RBP12.34□□□□□ -0.43
PDGFA-201ENST00000354513 MRPS24Q96EL2 167 aaKnown RBP12.34□□□□□ -0.43
PDGFA-201ENST00000354513 NABP2Q9BQ15 211 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
PDGFA-201ENST00000354513 OR51E2Q9H255 320 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 TAF9BQ9HBM6 251 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 CKLFQ9UBR5 152 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 STUB1Q9UNE7 303 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 PEX16Q9Y5Y5 336 aa12.34□□□□□ -0.43
PDGFA-201ENST00000354513 IGHV7-81A0A0B4J1V7 117 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 ATP6V0E1O15342 81 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 NHLRC4P0CG21 123 aaPredicted RBP12.33□□□□□ -0.44
PDGFA-201ENST00000354513 MGMTP16455 207 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 NDPQ00604 133 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 GPR176Q14439 515 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 FAM27D1Q5T7N8 215 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 CD200R1LQ6Q8B3 271 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 JAGN1Q8N5M9 183 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 ZNF491Q8N8L2 437 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 OR11H1Q8NG94 326 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 PHYHIPQ92561 330 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 ASCL2Q99929 193 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 CHCHD6Q9BRQ6 235 aa12.33□□□□□ -0.44
PDGFA-201ENST00000354513 ZMAT5Q9UDW3 170 aaKnown RBP12.33□□□□□ -0.44
PDGFA-201ENST00000354513 SSR3Q9UNL2 185 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms