RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 UEVLDQ8IX04 471 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 DEFB125Q8N687 156 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 SCGB1C1Q8TD33 95 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 FAM216AQ8WUB2 273 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 NUS1Q96E22 293 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 DERL1Q9BUN8 251 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 HDAC8Q9BY41 377 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 MRPL13Q9BYD1 178 aaKnown RBP9.12□□□□□ -0.95
CAPN3-203ENST00000349748 THYN1Q9P016 225 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 ANXA10Q9UJ72 324 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 OR1A2Q9Y585 309 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 A0A1W2PS18 150 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 OTOL1A6NHN0 477 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-203ENST00000349748 TMEM250H0YL14 139 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 FCN1O00602 326 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 IGKV1D-33P01593 117 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 IGKV1-33P01594 117 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 NTF3P20783 257 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 LTBRP36941 435 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 BVES-AS1Q5T3Y7 98 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 PARM1Q6UWI2 310 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 TCF24Q7RTU0 167 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 NRSN1Q8IZ57 195 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 DEFB123Q8N688 67 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 CCDC3Q9BQI4 270 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 CLEC7AQ9BXN2 247 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 DECR2Q9NUI1 292 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 SLC39A9Q9NUM3 307 aa9.12□□□□□ -0.95
CAPN3-203ENST00000349748 F5P12259 2224 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 HAND1O96004 215 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 CA2P00918 260 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 NRASP01111 189 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 KRASP01116 189 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 IER3P46695 156 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 THBS3P49746 956 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 FOXL2P58012 376 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 FMODQ06828 376 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 FOXL1Q12952 345 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 PDGFRLQ15198 375 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 PRTGQ2VWP7 1150 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 PHYHD1Q5SRE7 291 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 YAF2Q8IY57 180 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 APOOQ9BUR5 198 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 PLA2G2FQ9BZM2 168 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 TMEM38BQ9NVV0 291 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 SPAARA0A1B0GVQ0 90 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 CRYAAP02489 173 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 MSR1P21757 451 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 GPR6P46095 362 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-203ENST00000349748 PPOXP50336 477 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 PAX9P55771 341 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 SELENOVP59797 346 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 HIST3H3Q16695 136 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 KRTCAP3Q53RY4 240 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 Q56UQ5 140 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 SHISA2Q6UWI4 295 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 FAM58AQ8N1B3 248 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 RPP25LQ8N5L8 163 aaKnown RBP9.11□□□□□ -0.95
CAPN3-203ENST00000349748 FGF14Q92915 247 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 FNDC4Q9H6D8 234 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-203ENST00000349748 GPR27Q9NS67 375 aa9.11□□□□□ -0.95
CAPN3-203ENST00000349748 GAGE10A6NGK3 116 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 RAMP3O60896 148 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 CTSEP14091 401 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 HNRNPA2B1P22626 353 aaKnown RBP9.1□□□□□ -0.95
CAPN3-203ENST00000349748 OTX2P32243 289 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 DNM1P34Q6PK57 102 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 BRICD5Q6PL45 260 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 CBLN3Q6UW01 205 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 SFTPA1Q8IWL2 248 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 GMPPAQ96IJ6 420 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-203ENST00000349748 CHRDL1Q9BU40 450 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 PBOV1Q9GZY1 135 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 MUC3AQ02505 3323 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 HRKO00198 91 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 MLNRO43193 412 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 PAGE4O60829 102 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 NKX2-2O95096 273 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 UCP1P25874 307 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 Q0VG73 95 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 MLF2Q15773 248 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-203ENST00000349748 PRICKLE4Q2TBC4 344 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 HLA-DRB5Q30154 266 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 VN1R4Q7Z5H5 301 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF721Q8TF20 911 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 FAM222BQ8WU58 562 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 LRRC61Q9BV99 259 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 PLEKHJ1Q9NW61 149 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 FAM206AQ9NX38 181 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 TRIOO75962 3097 aa9.1□□□□□ -0.95
CAPN3-203ENST00000349748 TRAV9-2A0A087WT02 112 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 SNURFLB1AK76 121 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 M0R1X1 148 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 PLPP3O14495 311 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 SLC31A1O15431 190 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 TNFSF15O95150 251 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 DEFA4P12838 97 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 CKS1BP61024 79 aa9.09□□□□□ -0.95
CAPN3-203ENST00000349748 ZNF90Q03938 601 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms