RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 FOCADQ5VW36 1801 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 ISG15P05161 165 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 EGR1P18146 543 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 CXCL12P48061 93 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 PPP1CAP62136 330 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 WIPI1Q5MNZ9 446 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-202ENST00000345356 ST6GALNAC6Q969X2 333 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 GPR146Q96CH1 333 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 OR8B2Q96RD0 313 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 IMMP2LQ96T52 175 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 FAM60AQ9NP50 221 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 RPRMQ9NS64 109 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 A0A1B0GTI1 187 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 M0R296 226 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 NDUFS8O00217 210 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 CD40P25942 277 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 PCOLCE2Q9UKZ9 415 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM210A6NLX4 147 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 A8MWL6 223 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 LDLRAD4O15165 306 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 STARD6P59095 220 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 LDLRAD2Q5SZI1 272 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 MYOZ3Q8TDC0 251 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 NUDT16L1Q9BRJ7 211 aaKnown RBP10.51□□□□□ -0.73
COL12A1-202ENST00000345356 NDUFA2O43678 99 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 NPBWR2P48146 333 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 OR10D3Q8NH80 312 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 MPC1Q9Y5U8 109 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 PTPRFP10586 1907 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 OOEPA6NGQ2 149 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 NGFRP08138 427 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 ZNF766Q5HY98 468 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM52Q8NDY8 209 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 NGBQ9NPG2 151 aa10.51□□□□□ -0.73
COL12A1-202ENST00000345356 VENTXO95231 258 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 MAS1LP35410 378 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 RIPPLY3P57055 190 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM196Q5HYL7 178 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 CYP2G1PQ6ZSU1 146 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM45BQ96B21 275 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 SLC25A33Q9BSK2 321 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 F8VVB4 439 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 F8VWA3 439 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 KLF7O75840 302 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-202ENST00000345356 CTGFP29279 349 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 EIF4EBP2Q13542 120 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-202ENST00000345356 ZBTB34Q8NCN2 500 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 OR2Z1Q8NG97 314 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 FAM216AQ8WUB2 273 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 GTF3AQ92664 365 aaKnown RBP10.5□□□□□ -0.73
COL12A1-202ENST00000345356 PMCHL2Q9BQD1 86 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 C2orf88Q9BSF0 95 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 RNF126Q9BV68 326 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 EML2O95834 649 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 RCC1LQ96I51 464 aaKnown RBP10.5□□□□□ -0.73
COL12A1-202ENST00000345356 SDF2L1Q9HCN8 221 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 LILRA5A6NI73 299 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 SCTP09683 121 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 GALNSP34059 522 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 CLDN18P56856 261 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 FBXO46Q6PJ61 603 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-202ENST00000345356 FER1L6-AS2Q96M78 137 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 DERL1Q9BUN8 251 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 NPVFQ9HCQ7 196 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 CKAP5Q14008 2032 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 TMSB15BA0A087X1C1 80 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 GDF9O60383 454 aa10.5□□□□□ -0.73
COL12A1-202ENST00000345356 M0R1B8 84 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 LINC01590Q5TEZ4 76 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 CLDND2Q8NHS1 167 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM170AQ8WVE7 144 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM70Q9BUB7 260 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 IGHV5-51A0A0C4DH38 117 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM238LA0A1B0GVL6 79 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 A6NJY4 79 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 MPDU1O75352 247 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 ARL14EPLP0DKL9 152 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 MOB3BQ86TA1 216 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 ZNF430Q9H8G1 570 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-202ENST00000345356 A0A1W2PPE3 182 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 F5H697 171 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 PGLYRP1O75594 196 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-202ENST00000345356 GPR3P46089 330 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 CCR5P51681 352 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 PRRX1P54821 245 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 ARF6P62330 175 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 MARS2Q96GW9 593 aaKnown RBP10.49□□□□□ -0.73
COL12A1-202ENST00000345356 LRRC61Q9BV99 259 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 SPTY2D1-AS1A0A0U1RR47 76 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 S1PR2O95136 353 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 MIC13Q5XKP0 118 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 PAXXQ9BUH6 204 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 ASCL3Q9NQ33 180 aa10.49□□□□□ -0.73
COL12A1-202ENST00000345356 ZNF256Q9Y2P7 627 aaPredicted RBP10.49□□□□□ -0.73
COL12A1-202ENST00000345356 SPRY3O43610 288 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 SNCGO76070 127 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 LINC00614P0C842 121 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 SPRED2Q7Z698 418 aa10.48□□□□□ -0.73
COL12A1-202ENST00000345356 DOLPP1Q86YN1 238 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms