RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SAXO1Q8IYX7 474 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 IMMP2LQ96T52 175 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 SLC22A20A6NK97 555 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 NDUFB4O95168 129 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 SP1P08047 785 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF735P0CB33 412 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 IBA57Q5T440 356 aaKnown RBP4.15□□□□□ -1.75
CSMD3-203ENST00000343508 ASPHD2Q6ICH7 369 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 FBLN5Q9UBX5 448 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 KLF13Q9Y2Y9 288 aaPredicted RBP4.15□□□□□ -1.75
CSMD3-203ENST00000343508 LYL1P12980 280 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 IER3P46695 156 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 CAMPP49913 170 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 MRPL52Q86TS9 123 aaKnown RBP4.15□□□□□ -1.75
CSMD3-203ENST00000343508 SFTPA1Q8IWL2 248 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 ZCCHC14Q8WYQ9 949 aaKnown RBP4.15□□□□□ -1.75
CSMD3-203ENST00000343508 OR6C3Q9NZP0 311 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 SIT1Q9Y3P8 196 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 A0A1W2PN81 502 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 KCNMB1Q16558 191 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 PRSS3P2Q8NHM4 247 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM265A0A087WTH1 108 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 METTL12A8MUP2 240 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 BTF3P20290 206 aaKnown RBP4.15□□□□□ -1.75
CSMD3-203ENST00000343508 MPLP40238 635 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 FHITP49789 147 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 TNFRSF9Q07011 255 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF766Q5HY98 468 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 PDPNQ86YL7 162 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 PERPQ96FX8 193 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 ADTRPQ96IZ2 230 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 NUP210Q8TEM1 1887 aaPredicted RBP4.15□□□□□ -1.75
CSMD3-203ENST00000343508 SLC25A5P05141 298 aaKnown RBP4.15□□□□□ -1.75
CSMD3-203ENST00000343508 FAM157CP0CG43 387 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 G6PCP35575 357 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF818PQ6ZRF7 136 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 OR4S2Q8NH73 311 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 WDYHV1Q96HA8 205 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 DCAF16Q9NXF7 216 aa4.15□□□□□ -1.75
CSMD3-203ENST00000343508 LRRC3CA6NJW4 275 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 LMX1BO60663 402 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 IGLV3-21P80748 117 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 OR1C1Q15619 314 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 NFAM1Q8NET5 270 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV1OR21-1A0A087WYE8 117 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 A6NDN8 102 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 GZMHP20718 246 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 HIST1H2BLQ99880 126 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 PLA2G2FQ9BZM2 168 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 NGBQ9NPG2 151 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 PGLYRP1O75594 196 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 RNF224P0DH78 156 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 SMAD4Q13485 552 aaKnown RBP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 VHLLQ6RSH7 139 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 OR2I1PQ8NGU4 316 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 DENND4CQ5VZ89 1909 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 BMPR1BO00238 502 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 VEGFBP49765 207 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 HERPUD1Q15011 391 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 DNLZQ5SXM8 178 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 OR2V2Q96R30 315 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 CHRNA10Q9GZZ6 450 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 SPINT1O43278 529 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 CHRNB4P30926 498 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 OR4A47Q6IF82 309 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 C19orf24Q9BVV8 132 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 C6orf15Q6UXA7 325 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 CYP2G1PQ6ZSU1 146 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 FGFRL1Q8N441 504 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 WDR31Q8NA23 367 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 OR1K1Q8NGR3 316 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 CDC42EP3Q9UKI2 254 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM56-RWDD3S4R434 201 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF891A8MT65 544 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 SCTP09683 121 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 DMRTA1Q5VZB9 504 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 OR2M3Q8NG83 312 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 FGF11Q92914 225 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 OR2H1Q9GZK4 316 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 CYTL1Q9NRR1 136 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 PXMP4Q9Y6I8 212 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 HPRT1P00492 218 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 FGF5P12034 268 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 HTR1DP28221 377 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 TRA2AQ13595 282 aaKnown RBP eCLIP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM92Q6UXU6 159 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 SPNS3Q6ZMD2 512 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 HIF1ANQ9NWT6 349 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF207O43670 478 aaKnown RBP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 OR5AL1P0C617 328 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 LIFP15018 202 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 TRBV24-1A0A075B6N3 115 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 DPRXA6NFQ7 191 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 SMPD2O60906 423 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 P01737 135 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 CELA2BP08218 269 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-203ENST00000343508 SRFP11831 508 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 BPIFA4PQ86YQ2 179 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 C1orf174Q8IYL3 243 aa4.14□□□□□ -1.75
CSMD3-203ENST00000343508 SYNGR1O43759 233 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms