RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CD82P27701 267 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 SUMO3P55854 103 aaPredicted RBP12.67□□□□□ -0.38
CLCN1-201ENST00000343257 ZXDAP98168 799 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 MMDQ15546 238 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 C9orf135Q5VTT2 229 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 OR10G9Q8NGN4 311 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 OR10G7Q8NGN6 311 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 RAB40CQ96S21 281 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 CRIM1Q9NZV1 1036 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 EML6Q6ZMW3 1958 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 AQP7O14520 342 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 GPM6AP51674 278 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 CARD18P57730 90 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 ZNF114Q8NC26 417 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 OR5D13Q8NGL4 314 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 OR1F12Q8NHA8 337 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 OR5P3Q8WZ94 311 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 ZDHHC11Q9H8X9 412 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 R4GN57 208 aa12.67□□□□□ -0.38
CLCN1-201ENST00000343257 GGCTO75223 188 aaKnown RBP12.66□□□□□ -0.38
CLCN1-201ENST00000343257 NAPSAO96009 420 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 CELA2AP08217 269 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 CBLN1P23435 193 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 OTX1P32242 354 aaPredicted RBP12.66□□□□□ -0.38
CLCN1-201ENST00000343257 HNRNPKP61978 463 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLCN1-201ENST00000343257 PPP1CBP62140 327 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 HBG1P69891 147 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 HBG2P69892 147 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 TIPARPQ7Z3E1 657 aaKnown RBP12.66□□□□□ -0.38
CLCN1-201ENST00000343257 SGMS2Q8NHU3 365 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 ZNF501Q96CX3 271 aaPredicted RBP12.66□□□□□ -0.38
CLCN1-201ENST00000343257 VAMP8Q9BV40 100 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 OR1A1Q9P1Q5 309 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 TNFSF11O14788 317 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 RAB7AP51149 207 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 FUT6P51993 359 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 FFAR4Q5NUL3 377 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 ETFRF1Q6IPR1 90 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 ZNF709Q8N972 641 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 MIEN1Q9BRT3 115 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 PTRH2Q9Y3E5 179 aaKnown RBP12.66□□□□□ -0.38
CLCN1-201ENST00000343257 LRP4O75096 1905 aa12.66□□□□□ -0.38
CLCN1-201ENST00000343257 FAM186AA6NE01 2351 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 CLEC18AA5D8T8 446 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 H0Y980 276 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 SPINK4O60575 86 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 WDR1O75083 606 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 KRTDAPP60985 99 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 CLEC18CQ8NCF0 446 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 SAMD10Q9BYL1 202 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 CEP290O15078 2479 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 IGHV3-64DA0A0J9YX35 117 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 DUXBA0A1W2PPF3 345 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 C11orf94C9JXX5 98 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 M0QZK8 103 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 TUSC2O75896 110 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 NDUFB4O95168 129 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 ATP5G3P48201 142 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 TFF3Q07654 80 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 CARFQ8N187 725 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 FREM2Q5SZK8 3169 aa12.65□□□□□ -0.38
CLCN1-201ENST00000343257 FRMD6-AS1P0C7T7 363 aa12.65□□□□□ -0.39
CLCN1-201ENST00000343257 DRD1P21728 446 aa12.65□□□□□ -0.39
CLCN1-201ENST00000343257 COL8A2P25067 703 aa12.65□□□□□ -0.39
CLCN1-201ENST00000343257 SERF2P84101 59 aa12.65□□□□□ -0.39
CLCN1-201ENST00000343257 TGFBR3Q03167 851 aa12.65□□□□□ -0.39
CLCN1-201ENST00000343257 C1orf53Q5VUE5 145 aa12.65□□□□□ -0.39
CLCN1-201ENST00000343257 NFAM1Q8NET5 270 aaPredicted RBP12.65□□□□□ -0.39
CLCN1-201ENST00000343257 ANAPC16Q96DE5 110 aa12.65□□□□□ -0.39
CLCN1-201ENST00000343257 ABHD14BQ96IU4 210 aa12.65□□□□□ -0.39
CLCN1-201ENST00000343257 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.39
CLCN1-201ENST00000343257 SERF1AO75920 110 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 TIAF1O95411 115 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 IGKV1-5P01602 117 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 CHRNB4P30926 498 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 RPL15P61313 204 aaKnown RBP12.64□□□□□ -0.39
CLCN1-201ENST00000343257 GCSAMLQ5JQS6 135 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 RNASE8Q8TDE3 154 aaKnown RBP12.64□□□□□ -0.39
CLCN1-201ENST00000343257 NEIL1Q96FI4 390 aaPredicted RBP12.64□□□□□ -0.39
CLCN1-201ENST00000343257 GPR35Q9HC97 309 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 CD207Q9UJ71 328 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 RNF150Q9ULK6 438 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 LILRA5A6NI73 299 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 SYNGR3O43761 229 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 NTF4P34130 210 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 OR8B8Q15620 311 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 SLC23A3Q6PIS1 610 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 BAGE3Q86Y29 109 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 BAGE2Q86Y30 109 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 WDYHV1Q96HA8 205 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 AGMATQ9BSE5 352 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 PSMG3Q9BT73 122 aaPredicted RBP12.64□□□□□ -0.39
CLCN1-201ENST00000343257 TMEM9BQ9NQ34 198 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 CLN8Q9UBY8 286 aa12.64□□□□□ -0.39
CLCN1-201ENST00000343257 A0A1W2PPC4 97 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms