RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SMPD2O60906 423 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 CTSSP25774 331 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 ZNF133P52736 654 aaPredicted RBP11.11□□□□□ -0.63
COL18A1-201ENST00000342220 FAM57AQ8TBR7 257 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 SPACA1Q9HBV2 294 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 GLRX2Q9NS18 164 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 KPTNQ9Y664 436 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 MED19A0JLT2 244 aaPredicted RBP11.11□□□□□ -0.63
COL18A1-201ENST00000342220 OR5H1A6NKK0 313 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 HSPA12AO43301 675 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 IL15RAQ13261 267 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 PHLDA2Q53GA4 152 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 THNSL2Q86YJ6 484 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 AK3Q9UIJ7 227 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 RPL36A-HNRNPH2H7BZ11 118 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 LPAR6P43657 344 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 NKX6-1P78426 367 aaPredicted RBP11.1□□□□□ -0.63
COL18A1-201ENST00000342220 IGFL3Q6UXB1 125 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 SNHG12Q9BXW3 62 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 PARP12Q9H0J9 701 aaKnown RBP11.1□□□□□ -0.63
COL18A1-201ENST00000342220 ATP23Q9Y6H3 246 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 IGHV3OR15-7A0A075B7D8 119 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 FAM189A2Q15884 450 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 KRTCAP3Q53RY4 240 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 TAF9BQ9HBM6 251 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 C14orf166Q9Y224 244 aaKnown RBP11.1□□□□□ -0.63
COL18A1-201ENST00000342220 FBXO24O75426 580 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 OR2C1O95371 312 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 HKR1P10072 659 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 ZNF16P17020 682 aaPredicted RBP11.1□□□□□ -0.63
COL18A1-201ENST00000342220 IL2RGP31785 369 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 ALDH3B1P43353 468 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 IAH1Q2TAA2 248 aaPredicted RBP11.1□□□□□ -0.63
COL18A1-201ENST00000342220 ZNF718Q3SXZ3 478 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 WDR31Q8NA23 367 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 RND1Q92730 232 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 ZNF2Q9BSG1 426 aaPredicted RBP11.1□□□□□ -0.63
COL18A1-201ENST00000342220 MTCH1Q9NZJ7 389 aa11.1□□□□□ -0.63
COL18A1-201ENST00000342220 ASH1LQ9NR48 2969 aaKnown RBP11.09□□□□□ -0.63
COL18A1-201ENST00000342220 TACC2O95359 2948 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 SMCO3A2RU48 225 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 GNG3P63215 75 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 CCL8P80075 99 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
COL18A1-201ENST00000342220 SMIM3Q9BZL3 60 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 ITPR1Q14643 2758 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 IGHV1-18A0A0C4DH31 117 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 IGLV3-1P01715 115 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 PET100P0DJ07 73 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 RFESDQ8TAC1 157 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.09□□□□□ -0.632e-6■□□□□ 9.6
COL18A1-201ENST00000342220 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 URGCP-MRPS24S4R325 110 aa11.09□□□□□ -0.63
COL18A1-201ENST00000342220 GRNP28799 593 aaKnown RBP11.08□□□□□ -0.64
COL18A1-201ENST00000342220 SP6Q3SY56 376 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 MALSU1Q96EH3 234 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 SMIM8Q96KF7 97 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 FGF23Q9GZV9 251 aaPredicted RBP11.08□□□□□ -0.64
COL18A1-201ENST00000342220 TUBA4BQ9H853 241 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 SERPINE3A8MV23 424 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 MSTNO14793 375 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 TNFSF12O43508 249 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 HIST3H2BBQ8N257 126 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 R3HDM4Q96D70 268 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 CNTNAP3Q9BZ76 1288 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 MEMO1Q9Y316 297 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 ARHGAP21Q5T5U3 1957 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 FLNCQ14315 2725 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 IGHV2OR16-5A0A0B4J2B6 119 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 ZNF154Q13106 437 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 MRPL24Q96A35 216 aaKnown RBP11.08□□□□□ -0.64
COL18A1-201ENST00000342220 RTL8AQ9BWD3 113 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 TM2D1Q9BX74 207 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 C1orf123Q9NWV4 160 aa11.08□□□□□ -0.64
COL18A1-201ENST00000342220 LSM5Q9Y4Y9 91 aaKnown RBP11.08□□□□□ -0.64
COL18A1-201ENST00000342220 C16orf97H3BN30 126 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 DEGS1O15121 323 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 NXPH3O95157 252 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 SCGB1D2O95969 90 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 CD5P06127 495 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 RPL12P30050 165 aaKnown RBP11.07□□□□□ -0.64
COL18A1-201ENST00000342220 DVL1P1P54792 670 aaPredicted RBP11.07□□□□□ -0.64
COL18A1-201ENST00000342220 SELENOVP59797 346 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 OR8B8Q15620 311 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 CEACAM21Q3KPI0 293 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 CLEC2AQ6UVW9 174 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 SAT2Q96F10 170 aaPredicted RBP11.07□□□□□ -0.64
COL18A1-201ENST00000342220 PLSCR4Q9NRQ2 329 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 CBLN4Q9NTU7 201 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 AMDHD2Q9Y303 409 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 CCDC168Q8NDH2 2452 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 K7EPK0 472 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 OR8U9P0C7N5 309 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 FGF7P21781 194 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 FCGR2CP31995 323 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 FAM71E2Q8N5Q1 922 aa11.07□□□□□ -0.64
COL18A1-201ENST00000342220 OR8U1Q8NH10 309 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms