RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 ARF6P62330 175 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 C4orf46Q504U0 113 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 ESCO2Q56NI9 601 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.39□□□□□ -0.592e-12■■■■■ 45.1
PMS1-201ENST00000342075 OTOGQ6ZRI0 2925 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 SLC5A7Q9GZV3 580 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 RBM7Q9Y580 266 aaKnown RBP11.39□□□□□ -0.59
PMS1-201ENST00000342075 OR4E1P0C645 316 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 FPR2P25090 351 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 SLC9A3R2Q15599 337 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 SP6Q3SY56 376 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 MORN2Q502X0 79 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 SUCNR1Q9BXA5 334 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 OR2D2Q9H210 308 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 SIRT7Q9NRC8 400 aa11.39□□□□□ -0.59
PMS1-201ENST00000342075 CR1P17927 2039 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 F2RL2O00254 374 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 VAMP1P23763 118 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 PIGPP57054 158 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 SUPT4H1P63272 117 aaKnown RBP11.38□□□□□ -0.59
PMS1-201ENST00000342075 DRAXINQ8NBI3 349 aaPredicted RBP11.38□□□□□ -0.59
PMS1-201ENST00000342075 CASTOR1Q8WTX7 329 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 CORO2AQ92828 525 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 NINJ1Q92982 152 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 ZNF729A6NN14 1252 aaPredicted RBP11.38□□□□□ -0.59
PMS1-201ENST00000342075 DIRAS3O95661 229 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 PAX6P26367 422 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 C2orf68Q2NKX9 166 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 KRTAP1-3Q8IUG1 177 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 UXS1Q8NBZ7 420 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 GHITMQ9H3K2 345 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 SLC2A9Q9NRM0 540 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 IDI2-AS1Q9NZ38 188 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 MGAT4AQ9UM21 535 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 UBE2J1Q9Y385 318 aaPredicted RBP11.38□□□□□ -0.59
PMS1-201ENST00000342075 ABCA1O95477 2261 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 LOC105371242A0A075B767 164 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 HLA-AP01891 365 aaKnown RBP11.38□□□□□ -0.59
PMS1-201ENST00000342075 CTXN2P0C2S0 81 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 DNASE1P24855 282 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 MEF2CQ06413 473 aaPredicted RBP11.38□□□□□ -0.59
PMS1-201ENST00000342075 DHRS2Q13268 280 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 RPL39P5Q59GN2 51 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 CT45A1Q5HYN5 189 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 Q5PR19 223 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 CT45A3Q8NHU0 189 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 AGMATQ9BSE5 352 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 GFOD1Q9NXC2 390 aa11.38□□□□□ -0.59
PMS1-201ENST00000342075 BCAP31P51572 246 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 KLRD1Q13241 179 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 GLDNQ6ZMI3 551 aaPredicted RBP11.37□□□□□ -0.59
PMS1-201ENST00000342075 Q8N7P7 452 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 ZDHHC22Q8N966 263 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 WDR89Q96FK6 387 aaPredicted RBP11.37□□□□□ -0.59
PMS1-201ENST00000342075 BARX1Q9HBU1 254 aaPredicted RBP11.37□□□□□ -0.59
PMS1-201ENST00000342075 A0A1W2PRD5 423 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 A0A1W2PRF3 423 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 A0A1W2PRM7 423 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 PAX1P15863 534 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 HTD2P86397 168 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 SLC25A42Q86VD7 318 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 MXRA5Q9NR99 2828 aa11.37□□□□□ -0.59
PMS1-201ENST00000342075 PROP1O75360 226 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 DHFRP00374 187 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 IGHV1-8P0DP01 117 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 DIAPH2-AS1Q14236 149 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 OR2B11Q5JQS5 317 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 HEPN1Q6WQI6 88 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 FAM219AQ8IW50 185 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 PNKDQ8N490 385 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 OR51H1Q8NH63 302 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 CHAC2Q8WUX2 184 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 GAL3ST2Q9H3Q3 398 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 RNF223E7ERA6 249 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 CXCL3P19876 107 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 COX7A1P24310 79 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 LUMP51884 338 aaPredicted RBP11.36□□□□□ -0.59
PMS1-201ENST00000342075 TRAT1Q6PIZ9 186 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 DRAM1Q8N682 238 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 IFI27L2Q9H2X8 130 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 NCOR1P1Q9H4R4 102 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 JPT1Q9UK76 154 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 CUBNO60494 3623 aa11.36□□□□□ -0.59
PMS1-201ENST00000342075 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
PMS1-201ENST00000342075 ABCA11PQ4W5N1 156 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 OR2AK2Q8NG84 335 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 RTN4IP1Q8WWV3 396 aaPredicted RBP11.35□□□□□ -0.59
PMS1-201ENST00000342075 TP53RKQ96S44 253 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 OR51J1Q9H342 316 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 TAS2R3Q9NYW6 316 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 C14orf166Q9Y224 244 aaKnown RBP11.35□□□□□ -0.59
PMS1-201ENST00000342075 TRBV23-1A0A0A0MS06 115 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 C7orf66A4D0T2 115 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 MECP2P51608 486 aaKnown RBP11.35□□□□□ -0.59
PMS1-201ENST00000342075 PAX2Q02962 417 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 ANKRD55Q3KP44 614 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 Q3ZCU0 254 aa11.35□□□□□ -0.59
PMS1-201ENST00000342075 TBC1D26Q86UD7 250 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms