RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 UBE2NP61088 152 aaKnown RBP12.29□□□□□ -0.44
TDP2-201ENST00000341060 SLC25A24Q6NUK1 477 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 SLC25A40Q8TBP6 338 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 YPEL4Q96NS1 127 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 PRRC2CQ9Y520 2896 aaKnown RBP12.29□□□□□ -0.44
TDP2-201ENST00000341060 CACNA1GO43497 2377 aa12.29□□□□□ -0.44
TDP2-201ENST00000341060 DCHS1Q96JQ0 3298 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
TDP2-201ENST00000341060 TMEM210A6NLX4 147 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 ALKBH6Q3KRA9 238 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 DRAM1Q8N682 238 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 CYB561D1Q8N8Q1 229 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 HES4Q9HCC6 221 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 PSENENQ9NZ42 101 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 CLCF1Q9UBD9 225 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 OR2C1O95371 312 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 ACAA1P09110 424 aaPredicted RBP12.28□□□□□ -0.44
TDP2-201ENST00000341060 ZNF16P17020 682 aaPredicted RBP12.28□□□□□ -0.44
TDP2-201ENST00000341060 CEACAM6P40199 344 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 SOX8P57073 446 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 KHDC3LQ587J8 217 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 UBALD1Q8TB05 177 aa12.28□□□□□ -0.44
TDP2-201ENST00000341060 PSMG3Q9BT73 122 aaPredicted RBP12.28□□□□□ -0.44
TDP2-201ENST00000341060 PTPRBP23467 1997 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 A0A087WWC5 75 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 SPAARA0A1B0GVQ0 90 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 A0A1W2PPE3 182 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 RNF212BA8MTL3 300 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 C1QTNF9BB2RNN3 333 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 LYZL6O75951 148 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 S100A8P05109 93 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 IAPPP10997 89 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 SELEP16581 610 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 TNFSF10P50591 281 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 HBG1P69891 147 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 HBG2P69892 147 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 PSG7Q13046 419 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 ADAM5Q6NVV9 412 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 TMPRSS7Q7RTY8 843 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 C1QL4Q86Z23 238 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 ZNF525Q8N782 197 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 RAB39BQ96DA2 213 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 RSG1Q9BU20 258 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 METTL1Q9UBP6 276 aaKnown RBP12.27□□□□□ -0.45
TDP2-201ENST00000341060 RNF150Q9ULK6 438 aa12.27□□□□□ -0.45
TDP2-201ENST00000341060 CACNA1DQ01668 2161 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 FAM90A26D6RGX4 464 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 H0YL77 283 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 HAND1O96004 215 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 IGHV2-5P01817 119 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 METTL15P1P0C7V9 234 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 PMP22Q01453 160 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 INO80CQ6PI98 192 aaPredicted RBP12.26□□□□□ -0.45
TDP2-201ENST00000341060 FIP1L1Q6UN15 594 aaKnown RBP12.26□□□□□ -0.45
TDP2-201ENST00000341060 HEPN1Q6WQI6 88 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 Q6ZT83 130 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 FAM214BQ7L5A3 538 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 ZNF429Q86V71 674 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 GCNT2Q8N0V5 402 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 OR10G4Q8NGN3 311 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 SCGB1C1Q8TD33 95 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 MUCL1Q96DR8 90 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 OR14J1Q9UGF5 321 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 PPIHO43447 177 aaKnown RBP12.26□□□□□ -0.45
TDP2-201ENST00000341060 PSPNO60542 156 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 GRPP07492 148 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 FBP1P09467 338 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 CEBPGP53567 150 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 ARL16Q0P5N6 197 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 HAPLN4Q86UW8 402 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 ZNF645Q8N7E2 425 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 NIPSNAP3BQ9BS92 247 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 PARD6GQ9BYG4 376 aaPredicted RBP12.26□□□□□ -0.45
TDP2-201ENST00000341060 BCL2L14Q9BZR8 327 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 RPRMQ9NS64 109 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 CEP250Q9BV73 2442 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 ZFHX4Q86UP3 3567 aa12.26□□□□□ -0.45
TDP2-201ENST00000341060 CFAP47Q6ZTR5 3102 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 LOC400499M0QZD8 3231 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 IGHV3-64DA0A0J9YX35 117 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 LOC102723971A0A1B0GUV8 181 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 IGHG3P01860 377 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 OR2B8PP59922 312 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 UBE2KP61086 200 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 DLK1P80370 383 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 SERF2P84101 59 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 FGFRL1Q8N441 504 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 KLF14Q8TD94 323 aaPredicted RBP12.25□□□□□ -0.45
TDP2-201ENST00000341060 KCNIP1Q9NZI2 227 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 MMP24Q9Y5R2 645 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 DOCK11Q5JSL3 2073 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 TMEM30CPA0ZSE6 113 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 MLNRO43193 412 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 SMIM6P0DI80 62 aa12.25□□□□□ -0.45
TDP2-201ENST00000341060 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
TDP2-201ENST00000341060 MPV17P39210 176 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms