RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 MOB1BQ7L9L4 216 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 NR2C2APQ86WQ0 139 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 Q8N6K4 173 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 OR56B1Q8NGI3 324 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 OR2T10Q8NGZ9 312 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 YPEL2Q96QA6 119 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 PECRQ9BY49 303 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 RIMS4Q9H426 269 aaPredicted RBP11.6□□□□□ -0.55
ERCC1-203ENST00000340192 TXNL4BQ9NX01 149 aaKnown RBP11.6□□□□□ -0.55
ERCC1-203ENST00000340192 RAB22AQ9UL26 194 aa11.6□□□□□ -0.55
ERCC1-203ENST00000340192 TRBV6-6A0A0A6YYG2 114 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 ADARB2-AS1A8MUL3 147 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 ZNF736B4DX44 427 aaPredicted RBP11.59□□□□□ -0.55
ERCC1-203ENST00000340192 FGF16O43320 207 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 LANCL1O43813 399 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 FGF9P31371 208 aaPredicted RBP11.59□□□□□ -0.55
ERCC1-203ENST00000340192 LY6G6FQ5SQ64 297 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 NDUFA11Q86Y39 141 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 ODF3L1Q8IXM7 274 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 OR2AK2Q8NG84 335 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 RBMXL1Q96E39 390 aaKnown RBP11.59□□□□□ -0.55
ERCC1-203ENST00000340192 C12orf4Q9NQ89 552 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 STUB1Q9UNE7 303 aa11.59□□□□□ -0.55
ERCC1-203ENST00000340192 A0A0B4J203 849 aa11.58□□□□□ -0.56
ERCC1-203ENST00000340192 SMIM30A4D0T7 59 aa11.58□□□□□ -0.56
ERCC1-203ENST00000340192 NCBP2LA6PVI3 153 aaKnown RBP11.58□□□□□ -0.56
ERCC1-203ENST00000340192 MOSP00540 346 aa11.58□□□□□ -0.56
ERCC1-203ENST00000340192 TCTEX1D4Q5JR98 221 aa11.58□□□□□ -0.56
ERCC1-203ENST00000340192 C10orf99Q6UWK7 81 aa11.58□□□□□ -0.56
ERCC1-203ENST00000340192 CMSS1Q9BQ75 279 aaKnown RBP11.58□□□□□ -0.56
ERCC1-203ENST00000340192 Q9N2K0 584 aa11.58□□□□□ -0.56
ERCC1-203ENST00000340192 MGAT4AQ9UM21 535 aa11.58□□□□□ -0.56
ERCC1-203ENST00000340192 A0A1W2PRX2 142 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 OPN1MWP04001 364 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 OPN1MW2P0DN77 364 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 OPN1MW3P0DN78 364 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 SLC2A2P11168 524 aaPredicted RBP11.57□□□□□ -0.56
ERCC1-203ENST00000340192 RAB6AP20340 208 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 OR3A3P47888 321 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 HLA-DRB3P79483 266 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 CD83Q01151 205 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 LSAMPQ13449 338 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 MOGAT2Q3SYC2 334 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 KCTD21Q4G0X4 260 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 R3HDM4Q96D70 268 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 RAB3CQ96E17 227 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 MRPL20Q9BYC9 149 aaKnown RBP11.57□□□□□ -0.56
ERCC1-203ENST00000340192 IFI27L2Q9H2X8 130 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 PLSCR3Q9NRY6 295 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 SSR3Q9UNL2 185 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 KCNK7Q9Y2U2 307 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
ERCC1-203ENST00000340192 SAA2-SAA4A0A096LPE2 208 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 TCRBV4S1A1TA0A5B7 111 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 ST8SIA5O15466 376 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 IGHG2P01859 326 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 SAA2P0DJI9 122 aaPredicted RBP11.56□□□□□ -0.56
ERCC1-203ENST00000340192 DEFA6Q01524 100 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 NEDD8Q15843 81 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 ZNF833PQ6ZTB9 187 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 SLC35E3Q7Z769 313 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 Q8N9W7 124 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 OR4X2Q8NGF9 303 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 OR10R2Q8NGX6 335 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 NOL4LQ96MY1 436 aaPredicted RBP11.56□□□□□ -0.56
ERCC1-203ENST00000340192 S1PR3Q99500 378 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 PARP12Q9H0J9 701 aaKnown RBP11.56□□□□□ -0.56
ERCC1-203ENST00000340192 OR51E2Q9H255 320 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 LIN7CQ9NUP9 197 aaKnown RBP11.56□□□□□ -0.56
ERCC1-203ENST00000340192 OR1A1Q9P1Q5 309 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 SLC23A1Q9UHI7 598 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 PLXNB1O43157 2135 aa11.56□□□□□ -0.56
ERCC1-203ENST00000340192 A0A075B6Q4 140 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 PSMB11A5LHX3 300 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 LINC01548A6NM66 108 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 NOTOA8MTQ0 251 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 SERPINE3A8MV23 424 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 RAB27BO00194 218 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 HSPA12AO43301 675 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 KCNAB3O43448 404 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 SCTP09683 121 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 CD3GP09693 182 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 GNB3P16520 340 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 ZBTB25P24278 435 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 GADD45AP24522 165 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 CEACAM6P40199 344 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 F2RL1P55085 397 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 MRPS15P82914 257 aaKnown RBP11.55□□□□□ -0.56
ERCC1-203ENST00000340192 TPRA1Q86W33 373 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 OR4F17Q8NGA8 305 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 OR8H1Q8NGG4 311 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 CHPT1Q8WUD6 406 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 PTX4Q96A99 478 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 OR4F4Q96R69 305 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 NABP2Q9BQ15 211 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 CHCHD6Q9BRQ6 235 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 ABCG5Q9H222 651 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 LINC00527Q9UJ94 153 aa11.55□□□□□ -0.56
ERCC1-203ENST00000340192 TSSC4Q9Y5U2 329 aaPredicted RBP11.55□□□□□ -0.56
ERCC1-203ENST00000340192 METTL21EPA6NDL7 271 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms