RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SNCAP37840 140 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 CLINT1Q14677 625 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 DHRS7BQ6IAN0 325 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 TMEM88Q6PEY1 159 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 IGFL3Q6UXB1 125 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 CBLN2Q8IUK8 224 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 PRR18Q8N4B5 295 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 OR1L1Q8NH94 360 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 ABHD14AQ9BUJ0 271 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 CXXC4Q9H2H0 198 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 OBP2BQ9NPH6 170 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 TRAPPC2LQ9UL33 140 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 FAM215AQ9Y5M1 114 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 SLC25A15Q9Y619 301 aa10.9□□□□□ -0.66
CDK5RAP1-201ENST00000339269 C12orf77C9JDV5 145 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CHST1O43916 411 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 PTBP3O95758 552 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 SLC25A6P12236 298 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 ATP6V0CP27449 155 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 OR3A1P47881 315 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 MBNL2Q5VZF2 373 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 DRAM1Q8N682 238 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CLRN3Q8NCR9 226 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 MSL2Q9HCI7 577 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 C19orf12Q9NSK7 152 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 OR14J1Q9UGF5 321 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 PPP1R3CQ9UQK1 317 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 IGSF10Q6WRI0 2623 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 A0A1B0GU03 582 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 OR5H1A6NKK0 313 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TOR1AO14656 332 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CST7O76096 145 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 OMGP23515 440 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 DYNLT3P51808 116 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 DVL1P1P54792 670 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 BHLHA15Q7RTS1 189 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 PRR7Q8TB68 274 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TOLLIPQ9H0E2 274 aa10.89□□□□□ -0.67
CDK5RAP1-201ENST00000339269 PPP1CCP36873 323 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CEACAM6P40199 344 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 FABP6P51161 128 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 BRWD1-AS2P59051 145 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 HFEQ30201 348 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 SPRNQ5BIV9 151 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 ZNF474Q6S9Z5 364 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 Q6ZS92 163 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 FAM169BQ8N8A8 192 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 OR5C1Q8NGR4 320 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 LSM10Q969L4 123 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 AKR1E2Q96JD6 320 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 PROCRQ9UNN8 238 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CHD6Q8TD26 2715 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 SVILO95425 2214 aa10.88□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TMEM30CPA0ZSE6 113 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TXNL1O43396 289 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TIMM8AO60220 97 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 SERPINE2P07093 398 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 P0C879 139 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 EGR1P18146 543 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 NFYBP25208 207 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 HOXC12P31275 282 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 AESQ08117 197 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 P2RY6Q15077 328 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 SWI5Q1ZZU3 235 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 SLC35E4Q6ICL7 350 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 SPSB3Q6PJ21 355 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 HAPLN4Q86UW8 402 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 LRP11Q86VZ4 500 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 ESRP2Q9H6T0 727 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 UFSP2Q9NUQ7 469 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 LUZP4Q9P127 313 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CACNG5Q9UF02 275 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 STRAPQ9Y3F4 350 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 KIAA2026Q5HYC2 2103 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 PVALBP20472 110 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TUBG1P23258 451 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CAMLGP49069 296 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 RAB5CP51148 216 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 RPL30P62888 115 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CCL20P78556 96 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 BAXQ07812 192 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 ARL16Q0P5N6 197 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 ZADH2Q8N4Q0 377 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 CD177Q8N6Q3 437 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 RBMXL3Q8N7X1 1067 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 OR52L2PQ8NGH6 319 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 BCL2L14Q9BZR8 327 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 SLC25A31Q9H0C2 315 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TUBG2Q9NRH3 451 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 PPP1R14DQ9NXH3 145 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 FAM208BQ5VWN6 2430 aa10.87□□□□□ -0.67
CDK5RAP1-201ENST00000339269 ATRXP46100 2492 aa10.86□□□□□ -0.67
CDK5RAP1-201ENST00000339269 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP1-201ENST00000339269 TSPAN15O95858 294 aa10.86□□□□□ -0.67
CDK5RAP1-201ENST00000339269 HBZP02008 142 aa10.86□□□□□ -0.67
CDK5RAP1-201ENST00000339269 VAMP2P63027 116 aa10.86□□□□□ -0.67
CDK5RAP1-201ENST00000339269 RUNX1Q01196 453 aa10.86□□□□□ -0.67
CDK5RAP1-201ENST00000339269 ZNF616Q08AN1 781 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms