RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SEBOXQ9HB31 216 aaPredicted RBP9.14□□□□□ -0.95
RTN3-201ENST00000338850 RPS10P5Q9NQ39 176 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 MTCH1Q9NZJ7 389 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 KLF13Q9Y2Y9 288 aaPredicted RBP9.14□□□□□ -0.95
RTN3-201ENST00000338850 RTTNQ86VV8 2226 aa9.14□□□□□ -0.95
RTN3-201ENST00000338850 TEP1Q99973 2627 aaKnown RBP9.14□□□□□ -0.95
RTN3-201ENST00000338850 POLQO75417 2590 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 PDZD2O15018 2839 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 IGKV1-6A0A0C4DH72 117 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 RBFOX3A6NFN3 312 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 FAM24AA6NFZ4 105 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 KIAA1324LA8MWY0 1029 aaPredicted RBP9.13□□□□□ -0.95
RTN3-201ENST00000338850 ADAM20O43506 726 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 PGLYRP1O75594 196 aaPredicted RBP9.13□□□□□ -0.95
RTN3-201ENST00000338850 PATE4P0C8F1 98 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 COX6B1P14854 86 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 RAB5AP20339 215 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 TUBG1P23258 451 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 MEOX1P50221 254 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 RPL23AP62750 156 aaKnown RBP9.13□□□□□ -0.95
RTN3-201ENST00000338850 PNRC1Q12796 327 aaPredicted RBP9.13□□□□□ -0.95
RTN3-201ENST00000338850 GABRA6Q16445 453 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 SOHLH1Q5JUK2 328 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 MEX3BQ6ZN04 569 aaKnown RBP9.13□□□□□ -0.95
RTN3-201ENST00000338850 SLC35E3Q7Z769 313 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 DOLPP1Q86YN1 238 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 ODF3L1Q8IXM7 274 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 TCTEX1D1Q8N7M0 179 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 SUMF2Q8NBJ7 301 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 HSD17B11Q8NBQ5 300 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 SLAMF9Q96A28 289 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 CLCC1Q96S66 551 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 C12orf57Q99622 126 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 TTTY12Q9BZ98 90 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 EIF5A2Q9GZV4 153 aaKnown RBP9.13□□□□□ -0.95
RTN3-201ENST00000338850 SH3BGRL3Q9H299 93 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 TUBG2Q9NRH3 451 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 LIN7CQ9NUP9 197 aaKnown RBP9.13□□□□□ -0.95
RTN3-201ENST00000338850 POLDIP2Q9Y2S7 368 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 TIMM9Q9Y5J7 89 aa9.13□□□□□ -0.95
RTN3-201ENST00000338850 IGKV1D-13A0A0B4J2D9 117 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 FAM221AA4D161 298 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 TMEM210A6NLX4 147 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 RNF212BA8MTL3 300 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 KLRC4-KLRK1H3BQV0 150 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 C19orf84I3L1E1 186 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 WRBO00258 174 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 PRRG2O14669 202 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 AGPAT2O15120 278 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 TXNL1O43396 289 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 PPIHO43447 177 aaKnown RBP9.12□□□□□ -0.95
RTN3-201ENST00000338850 CLDN14O95500 239 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 SRP19P09132 144 aaKnown RBP9.12□□□□□ -0.95
RTN3-201ENST00000338850 SCTP09683 121 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 IGKV1-13P0DP09 117 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 PPP1CCP36873 323 aaKnown RBP9.12□□□□□ -0.95
RTN3-201ENST00000338850 TAGLN2P37802 199 aaKnown RBP9.12□□□□□ -0.95
RTN3-201ENST00000338850 ERVK11-1P61568 191 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 POLR2GP62487 172 aaKnown RBP eCLIP9.12□□□□□ -0.95
RTN3-201ENST00000338850 SERF2P84101 59 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 SPIN3Q5JUX0 258 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 AKR1C8PQ5T2L2 129 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 TMEM182Q6ZP80 229 aaPredicted RBP9.12□□□□□ -0.95
RTN3-201ENST00000338850 FAM58AQ8N1B3 248 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 ZFP62Q8NB50 900 aaPredicted RBP9.12□□□□□ -0.95
RTN3-201ENST00000338850 OR1K1Q8NGR3 316 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 OR5C1Q8NGR4 320 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 OR13D1Q8NGV5 346 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 FAM213BQ8TBF2 198 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 TMEM171Q8WVE6 324 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 MBD3L1Q8WWY6 194 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 WNT2BQ93097 391 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 P2RX4Q99571 388 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 VKORC1Q9BQB6 163 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 OR51I2Q9H344 312 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 GLRX2Q9NS18 164 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 MBNL3Q9NUK0 354 aaKnown RBP9.12□□□□□ -0.95
RTN3-201ENST00000338850 TMEM242Q9NWH2 141 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 TAAR3PQ9P1P4 343 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 WIPI2Q9Y4P8 454 aa9.12□□□□□ -0.95
RTN3-201ENST00000338850 CCDC168Q8NDH2 2452 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 TRAV24A0A0B4J272 114 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 C5orf49A4QMS7 147 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 SSSCA1O60232 199 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 SOX15O60248 233 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 CNOT4O95628 575 aaKnown RBP9.11□□□□□ -0.95
RTN3-201ENST00000338850 LY86O95711 162 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 IFNA17P01571 189 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 SELEP16581 610 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 GPM6AP51674 278 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 DYNLT3P51808 116 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 PAX9P55771 341 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 PAX5Q02548 391 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 ZNF146Q15072 292 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 DNLZQ5SXM8 178 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 Q6P435 159 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 TUSC5Q8IXB3 177 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 ZNF295-AS1Q8N0V1 137 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 TMEM251Q8N6I4 163 aa9.11□□□□□ -0.95
RTN3-201ENST00000338850 OR10V1Q8NGI7 309 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms