RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ACY3Q96HD9 319 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 ADTRPQ96IZ2 230 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 SLC35D1Q9NTN3 355 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 KIAA1456Q9P272 454 aa5.39□□□□□ -1.55
PRKDC-202ENST00000338368 PGLYRP1O75594 196 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 STUMQ69YW2 141 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 A0A0A6YYD4 124 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 A0A1B0GU03 582 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 RNF222A6NCQ9 220 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 AQP7O14520 342 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 HBZP02008 142 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 MBPP02686 304 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 ATP6V0CP27449 155 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 G6PCP35575 357 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 AKR1C3P42330 323 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 SMAGPQ0VAQ4 97 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 ATP6V1FQ16864 119 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CLRN3Q8NCR9 226 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 HSD17B10Q99714 261 aaKnown RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 RAB1BQ9H0U4 201 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 IGKV3D-15A0A087WSY6 115 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 SH2D7A6NKC9 451 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 LDLRAD4O15165 306 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CNIH1O95406 144 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 GALNT14Q96FL9 552 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 MDFIC2A0A1B0GVS7 189 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 GAPDHP04406 335 aaKnown RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CEBPDP49716 269 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 VMA21Q3ZAQ7 101 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 SEC11CQ9BY50 192 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 IL36GQ9NZH8 169 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 TMEM8BA6NDV4 472 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 MSGN1A6NI15 193 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 SS18L1O75177 396 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 OR2C1O95371 312 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 FGF7P21781 194 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 ZFP82Q8N141 532 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 GPR146Q96CH1 333 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 SAP30LQ9HAJ7 183 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 RPH3ALQ9UNE2 315 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 UBE2L5PA0A1B0GUS4 154 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 RPS2P15880 293 aaKnown RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 SULT1A2P50226 295 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 SLC35B3Q9H1N7 401 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 ARHGAP21Q5T5U3 1957 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 IGHV1-2P23083 117 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 GLIPR1P48060 266 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 RAB9AP51151 201 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 TMEM187Q14656 261 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 DPF1Q92782 380 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 PNRC2Q9NPJ4 139 aaKnown RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 EML5Q05BV3 1969 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 HLA-GP17693 338 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 ITLN1Q8WWA0 313 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 MED13LQ71F56 2210 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 IGHV3OR15-7A0A075B7D8 119 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 PPP5D1E7EU14 171 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 WNT9BO14905 357 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 RTBDNQ9BSG5 229 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-202ENST00000338368 F6UZH7 168 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CD3EP07766 207 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CT45A6P0DMU7 189 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CT45A5P0DMU8 189 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CT45A7P0DMV0 189 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 SULT1A1P50225 295 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 ERVS71-1P61550 626 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CT45A1Q5HYN5 189 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 OR52M1Q8NGK5 317 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 CT45A3Q8NHU0 189 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 OR2V2Q96R30 315 aa5.38□□□□□ -1.55
PRKDC-202ENST00000338368 RUNX1Q01196 453 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 FAM27E3Q08E93 113 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 SNX22Q96L94 193 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 DSCAMO60469 2012 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 MPTX1A8MV57 137 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 NQO2P16083 231 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 GNB1P62873 340 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 C15orf54Q8N8G6 183 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 ABHD14BQ96IU4 210 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 TP53RKQ96S44 253 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 IL36RNQ9UBH0 155 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 SRSF10O75494 262 aaKnown RBP5.37□□□□□ -1.55
PRKDC-202ENST00000338368 HIST1H3AP68431 136 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR10G4Q8NGN3 311 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR10G9Q8NGN4 311 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR10G7Q8NGN6 311 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 TMEM56Q96MV1 263 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 MS4A7Q9GZW8 240 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-202ENST00000338368 PLSCR2Q9NRY7 297 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF355PQ9NSJ1 428 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 GAB2Q9UQC2 676 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 RHBDL1O75783 438 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 CSRP1P21291 193 aaKnown RBP5.37□□□□□ -1.55
PRKDC-202ENST00000338368 LY6G6FQ5SQ64 297 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 NCR3LG1Q68D85 454 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 FGFRL1Q8N441 504 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR52L2PQ8NGH6 319 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR4F5Q8NH21 305 aa5.37□□□□□ -1.55
PRKDC-202ENST00000338368 OR4F4Q96R69 305 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms