RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 AUP1Q9Y679 476 aa11.41□□□□□ -0.58
HLCS-201ENST00000336648 SOD3P08294 240 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 ATP6V0CP27449 155 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 RAB9AP51151 201 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 LYZL2Q7Z4W2 148 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 GHITMQ9H3K2 345 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 PPIAL4EA0A075B759 164 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 PPIAL4DF5H284 164 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 H0Y980 276 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 K7N7A8 449 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 PPIAL4FP0DN26 164 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 WDR25Q64LD2 544 aaPredicted RBP11.4□□□□□ -0.58
HLCS-201ENST00000336648 MS4A7Q9GZW8 240 aaPredicted RBP11.4□□□□□ -0.58
HLCS-201ENST00000336648 PPIAL4AQ9Y536 164 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 TMEM189A5PLL7 270 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 FOLR2P14207 255 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 MAGEA5P43359 124 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 ZNF441Q8N8Z8 693 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 FAM222BQ8WU58 562 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 LSM10Q969L4 123 aaKnown RBP11.4□□□□□ -0.58
HLCS-201ENST00000336648 PSMG3Q9BT73 122 aaPredicted RBP11.4□□□□□ -0.58
HLCS-201ENST00000336648 WIPI2Q9Y4P8 454 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 FAM27BQ5VT28 67 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 OR11H7Q8NGC8 314 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 OR10AC1Q8NH08 325 aa11.4□□□□□ -0.58
HLCS-201ENST00000336648 SF3B6Q9Y3B4 125 aaKnown RBP11.4□□□□□ -0.58
HLCS-201ENST00000336648 LEPROTL1O95214 131 aa11.4□□□□□ -0.59
HLCS-201ENST00000336648 IGF2P01344 180 aa11.4□□□□□ -0.59
HLCS-201ENST00000336648 CDX1P47902 265 aaPredicted RBP11.4□□□□□ -0.59
HLCS-201ENST00000336648 C1QTNF12Q5T7M4 302 aa11.4□□□□□ -0.59
HLCS-201ENST00000336648 PTPMT1Q8WUK0 201 aaPredicted RBP11.4□□□□□ -0.59
HLCS-201ENST00000336648 RGP1Q92546 391 aaPredicted RBP11.4□□□□□ -0.59
HLCS-201ENST00000336648 TGIF2-C20orf24A0A0A6YYL0 155 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 KCNAB3O43448 404 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 HOXB1P14653 301 aaPredicted RBP11.39□□□□□ -0.59
HLCS-201ENST00000336648 PRNTQ86SH4 94 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 SLC25A10Q9UBX3 287 aaPredicted RBP11.39□□□□□ -0.59
HLCS-201ENST00000336648 DSPPQ9NZW4 1301 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 MYO9BQ13459 2157 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 LAMA4Q16363 1823 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 EML2O95834 649 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 MMDQ15546 238 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 ZNF600Q6ZNG1 722 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 FAM90A26D6RGX4 464 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 HLA-DRB1P01911 266 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 PSG2P11465 335 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 P2RY6Q15077 328 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 FAM53AQ6NSI3 398 aaPredicted RBP11.39□□□□□ -0.59
HLCS-201ENST00000336648 EBLN2Q6P2I7 272 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 TUBD1Q9UJT1 453 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 AMY1AP04745 511 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 CXCL3P19876 107 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 SGMS2Q8NHU3 365 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 DUSP15Q9H1R2 295 aaPredicted RBP11.39□□□□□ -0.59
HLCS-201ENST00000336648 PRRC2BQ5JSZ5 2229 aaKnown RBP11.39□□□□□ -0.59
HLCS-201ENST00000336648 TMSB15BA0A087X1C1 80 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 ZNF815PA8K554 130 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 HLA-DQA1P01909 254 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 HSPB1P04792 205 aaKnown RBP11.39□□□□□ -0.59
HLCS-201ENST00000336648 MFAP2P55001 183 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 TMEM78Q5T7P6 136 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 TMEM171Q8WVE6 324 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 RABAC1Q9UI14 185 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 ST6GALNAC2Q9UJ37 374 aa11.39□□□□□ -0.59
HLCS-201ENST00000336648 F11RQ9Y624 299 aaKnown RBP11.39□□□□□ -0.59
HLCS-201ENST00000336648 ARID1BQ8NFD5 2236 aaPredicted RBP11.38□□□□□ -0.59
HLCS-201ENST00000336648 PLA2G10O15496 165 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 C1QAP02745 245 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 OVCH2Q7RTZ1 564 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 SFRP2Q96HF1 295 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 FOXJ2Q9P0K8 574 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 PPP1R17O96001 155 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 RPS4XP62701 263 aaKnown RBP11.38□□□□□ -0.59
HLCS-201ENST00000336648 CEACAM21Q3KPI0 293 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 MEIG1Q5JSS6 88 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 SHISA5Q8N114 240 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 CCL27Q9Y4X3 112 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 PAPPA2Q9BXP8 1791 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 NDUFA2O43678 99 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 PTP4A3O75365 173 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 PRSS2P07478 247 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 RPL27AP46776 148 aaKnown RBP11.38□□□□□ -0.59
HLCS-201ENST00000336648 OR10J6PQ8NGY7 276 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 MAP1LC3AQ9H492 121 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 LRP5O75197 1615 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 TRAV8-7A0A075B6U6 113 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 PRDX2P32119 198 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 RPL31P62899 125 aaKnown RBP11.38□□□□□ -0.59
HLCS-201ENST00000336648 MS4A3Q96HJ5 214 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
HLCS-201ENST00000336648 SS18L1O75177 396 aaPredicted RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 FCGR3AP08637 254 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 FGF12P61328 243 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 SLC35B1P78383 322 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 C1QL3Q5VWW1 255 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 C16orf47Q6ZP98 133 aaPredicted RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms