RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 MT-ND4LP03901 98 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 ARG1P05089 322 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 FOLR2P14207 255 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 OR3A1P47881 315 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 HOXA1P49639 335 aaPredicted RBP14.92□□□□□ -0.02
LRCH3-201ENST00000334859 HABP2Q14520 560 aaPredicted RBP14.92□□□□□ -0.02
LRCH3-201ENST00000334859 C9orf106Q8NAJ2 232 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 UFSP2Q9NUQ7 469 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 RNF150Q9ULK6 438 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 DIDO1Q9BTC0 2240 aaKnown RBP14.92□□□□□ -0.02
LRCH3-201ENST00000334859 A0A1W2PPE2 198 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 RNF212BA8MTL3 300 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 CBR1P16152 277 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 IL2RGP31785 369 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 KIR2DL2P43627 348 aaPredicted RBP14.91□□□□□ -0.02
LRCH3-201ENST00000334859 RAB2AP61019 212 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 OR2B11Q5JQS5 317 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 RSG1Q9BU20 258 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 OR2D2Q9H210 308 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 ZFHX4Q86UP3 3567 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 CACNA1GO43497 2377 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 C12orf77C9JDV5 145 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 IGKV3-15P01624 115 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 TFF1P04155 84 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 FTH1P19P0C7X4 201 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 CD200P41217 278 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 AESQ08117 197 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 GUSBP1Q15486 140 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 PRAMEF6Q5VXH4 476 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 LILRB2Q8N423 598 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 ZNF808Q8N4W9 903 aaPredicted RBP14.91□□□□□ -0.02
LRCH3-201ENST00000334859 SCGB1C1Q8TD33 95 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 GALMQ96C23 342 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 EGLN1Q9GZT9 426 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 UNKLQ9H9P5 680 aaKnown RBP14.91□□□□□ -0.02
LRCH3-201ENST00000334859 HES4Q9HCC6 221 aa14.91□□□□□ -0.02
LRCH3-201ENST00000334859 hCG_1809904A0A1W2PP81 198 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 A0A1W2PR64 198 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 A0A1W2PRV1 198 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 GABRA2P47869 451 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 TRAV17A0A0B4J275 112 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 HBE1P02100 147 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 WT1P19544 449 aaPredicted RBP14.9□□□□□ -0.02
LRCH3-201ENST00000334859 COX5AP20674 150 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 FABP6P51161 128 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 SPANXN5Q5MJ07 72 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 FAM53AQ6NSI3 398 aaPredicted RBP14.9□□□□□ -0.02
LRCH3-201ENST00000334859 DPPA3Q6W0C5 159 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 FAM24BQ8N5W8 94 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 WDR31Q8NA23 367 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 NINJ1Q92982 152 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 CXXC4Q9H2H0 198 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 MSL2Q9HCI7 577 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 SVILO95425 2214 aa14.9□□□□□ -0.02
LRCH3-201ENST00000334859 OTOGLQ3ZCN5 2332 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 AQP7O14520 342 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 CECR9P0C854 216 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 HBG1P69891 147 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 HBG2P69892 147 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 ARL16Q0P5N6 197 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 FOXF2Q12947 444 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 ICAM4Q14773 271 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF645Q8N7E2 425 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 OR52L2PQ8NGH6 319 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 RBMXL1Q96E39 390 aaKnown RBP14.89□□□□□ -0.03
LRCH3-201ENST00000334859 TUBA4BQ9H853 241 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 BOD1L1Q8NFC6 3051 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 RAMP3O60896 148 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 SCAF4O95104 1147 aaKnown RBP14.89□□□□□ -0.03
LRCH3-201ENST00000334859 HBZP02008 142 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 FBP1P09467 338 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 FAM180AQ6UWF9 173 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 PIP4P1Q86T03 277 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 C11orf53Q8IXP5 236 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 FGFRL1Q8N441 504 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 CYB561D1Q8N8Q1 229 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 MRGPRDQ8TDS7 321 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 SARAFQ96BY9 339 aa14.89□□□□□ -0.03
LRCH3-201ENST00000334859 CNOT1A5YKK6 2376 aaKnown RBP14.88□□□□□ -0.03
LRCH3-201ENST00000334859 PRR33A8MZF0 331 aa14.88□□□□□ -0.03
LRCH3-201ENST00000334859 H3BQ15 152 aa14.88□□□□□ -0.03
LRCH3-201ENST00000334859 SRP19P09132 144 aaKnown RBP14.88□□□□□ -0.03
LRCH3-201ENST00000334859 HOXB1P14653 301 aaPredicted RBP14.88□□□□□ -0.03
LRCH3-201ENST00000334859 WDR82Q6UXN9 313 aa14.88□□□□□ -0.03
LRCH3-201ENST00000334859 HAPLN4Q86UW8 402 aa14.88□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF525Q8N782 197 aa14.88□□□□□ -0.03
LRCH3-201ENST00000334859 C1orf162Q8NEQ5 155 aaPredicted RBP14.88□□□□□ -0.03
LRCH3-201ENST00000334859 CLDND2Q8NHS1 167 aa14.88□□□□□ -0.03
LRCH3-201ENST00000334859 ASCL3Q9NQ33 180 aa14.88□□□□□ -0.03
LRCH3-201ENST00000334859 CACNA1DQ01668 2161 aa14.88□□□□□ -0.03
LRCH3-201ENST00000334859 OOEPA6NGQ2 149 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 KRASP01116 189 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 RAB5AP20339 215 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 SNRPEP62304 92 aaKnown RBP14.87□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF816Q0VGE8 651 aaPredicted RBP14.87□□□□□ -0.03
LRCH3-201ENST00000334859 RNF212Q495C1 297 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF506Q5JVG8 444 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 ACP7Q6ZNF0 438 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 COQ2Q96H96 371 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 GNG13Q9P2W3 67 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms