RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 OR4C45A6NMZ5 311 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF324O75467 553 aaPredicted RBP4.83□□□□□ -1.64
PTPRB-202ENST00000334414 PTGER1P34995 402 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 CXCL12P48061 93 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 ERV3-1Q14264 604 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 IL11RAQ14626 422 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 SPEM1Q8N4L4 309 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 CNRIP1Q96F85 164 aaPredicted RBP4.83□□□□□ -1.64
PTPRB-202ENST00000334414 GNB1LQ9BYB4 327 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 TRAV8-4A0A0B4J246 113 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF735P0CB33 412 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 MESTQ5EB52 335 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 DMRTA1Q5VZB9 504 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 DNM1P46Q6ZS02 220 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 CYP2G1PQ6ZSU1 146 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 LYG1Q8N1E2 194 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 LRTM2Q8N967 370 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 TM4SF19Q96DZ7 209 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 SPACA5Q96QH8 159 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 ST6GALNAC2Q9UJ37 374 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 SCN9AQ15858 1988 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 FFAR1O14842 300 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 MPZL1O95297 269 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 OR8I2Q8N0Y5 310 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 ORAOV1Q8WV07 137 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 GPR35Q9HC97 309 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 CLDN14O95500 239 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 SRIP30626 198 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 TNXAQ16473 311 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 SDHCQ99643 169 aaPredicted RBP4.83□□□□□ -1.64
PTPRB-202ENST00000334414 C2orf88Q9BSF0 95 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 MYO18AQ92614 2054 aaKnown RBP4.83□□□□□ -1.64
PTPRB-202ENST00000334414 A0A1B0GW64 132 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 DLL1O00548 723 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 HYPMO75409 117 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 ZGLP1P0C6A0 271 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 OR2K2Q8NGT1 345 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 GPR82Q96P67 336 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 TCFL5Q9UL49 500 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 LAMTOR2Q9Y2Q5 125 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 MC5RP33032 325 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF146Q15072 292 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 MOB3BQ86TA1 216 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 CIARTQ8N365 385 aaPredicted RBP4.83□□□□□ -1.64
PTPRB-202ENST00000334414 PLPPR1Q8TBJ4 325 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 KCNMB2Q9Y691 235 aa4.83□□□□□ -1.64
PTPRB-202ENST00000334414 K7EQS6 105 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 MGPP08493 103 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 CTSSP25774 331 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 STARD6P59095 220 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 HSD52Q0P140 79 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 MRPL43Q8N983 215 aaKnown RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 MS4A6AQ9H2W1 248 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 PRDM13Q9H4Q3 707 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 CEACAM16Q2WEN9 425 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 FBLN7Q53RD9 439 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 OR10J6PQ8NGY7 276 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM170AQ8WVE7 144 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 OR8B2Q96RD0 313 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 GMLQ99445 158 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 MBD1Q9UIS9 605 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 GPR132Q9UNW8 380 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 A0A1B0GWB2 263 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 NKX2-6A6NCS4 301 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 ETHE1O95571 254 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 FCGR3AP08637 254 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 ADAD2Q8NCV1 583 aaKnown RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 NUP37Q8NFH4 326 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 CRXO43186 299 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 PNLIPP16233 465 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 DLX6P56179 175 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 LYPD8Q6UX82 237 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 RTN4RL1Q86UN2 441 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 NUDT11Q96G61 164 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 TLNRD1Q9H1K6 362 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 BTAF1O14981 1849 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 KBTBD11-OT1A0A1B0GTJ5 212 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 VSIG8P0DPA2 414 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 PSG2P11465 335 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 CD40P25942 277 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM108Q6UXF1 575 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF841Q6ZN19 808 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 IL36BQ9NZH7 164 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM91Q6ZNR0 172 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 ATG4DQ86TL0 474 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF257Q9Y2Q1 563 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 NPIPB13A6NJU9 1138 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 NPIPB4C9JG80 1138 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 J3QT63 122 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 TSPOP30536 169 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 GPX4P36969 197 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 MRPS11P82912 194 aaKnown RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 OR4D5Q8NGN0 318 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 TAF15Q92804 592 aaKnown RBP eCLIP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF430Q9H8G1 570 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 SLC6A13Q9NSD5 602 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 SS18L1O75177 396 aaPredicted RBP4.82□□□□□ -1.64
PTPRB-202ENST00000334414 IFITM2Q01629 132 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 SLC37A2Q8TED4 501 aa4.82□□□□□ -1.64
PTPRB-202ENST00000334414 STRCP1A6NGW2 1772 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms