RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 WRBO00258 174 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 CYB5R3P00387 301 aaPredicted RBP11.66□□□□□ -0.54
TRAIP-201ENST00000331456 MMP9P14780 707 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 MUC1P15941 1255 aaPredicted RBP11.66□□□□□ -0.54
TRAIP-201ENST00000331456 EDDM3BP56851 147 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 CR1LQ2VPA4 569 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 TOR2AQ5JU69 321 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 NCMAPQ5T1S8 102 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 RPL7L1Q6DKI1 246 aaKnown RBP11.66□□□□□ -0.54
TRAIP-201ENST00000331456 ZNRF1Q8ND25 227 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 DMBX1Q8NFW5 382 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 RFESDQ8TAC1 157 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 FAM216AQ8WUB2 273 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 RNF141Q8WVD5 230 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 EDARADDQ8WWZ3 215 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 LRRC46Q96FV0 321 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 COQ3Q9NZJ6 369 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 NDRG3Q9UGV2 375 aa11.66□□□□□ -0.54
TRAIP-201ENST00000331456 BORCS7-ASMTA0A0B4J1R7 106 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 C1QTNF9P0C862 333 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 SFTPCP11686 197 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 AKR1C2P52895 323 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 CCL8P80075 99 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 ID3Q02535 119 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 STUMQ69YW2 141 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 TMED6Q8WW62 240 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 GPR146Q96CH1 333 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 C14orf79Q96F83 325 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 DCTN5Q9BTE1 182 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 REG4Q9BYZ8 158 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 ZNF665Q9H7R5 613 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 JPT1Q9UK76 154 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 BOD1L1Q8NFC6 3051 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 EPHA1P21709 976 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 POLR2GP62487 172 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAIP-201ENST00000331456 TLE1Q04724 770 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 FBXL19-AS1Q494R0 122 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 FAM209AQ5JX71 171 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 FAM201AQ5SY85 155 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 HSD17B13Q7Z5P4 300 aaPredicted RBP11.65□□□□□ -0.54
TRAIP-201ENST00000331456 TCTEX1D1Q8N7M0 179 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 RNASE6Q93091 150 aaKnown RBP11.65□□□□□ -0.54
TRAIP-201ENST00000331456 SLC25A31Q9H0C2 315 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 FAM234AQ9H0X4 552 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 GNG12Q9UBI6 72 aa11.65□□□□□ -0.54
TRAIP-201ENST00000331456 CADP27708 2225 aa11.65□□□□□ -0.55
TRAIP-201ENST00000331456 CEP295Q9C0D2 2601 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 FAM90A27PA6NNH2 459 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 ATXN7O15265 892 aaPredicted RBP11.64□□□□□ -0.55
TRAIP-201ENST00000331456 FGF16O43320 207 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 SSSCA1O60232 199 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 ATG12O94817 140 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 CD3EP07766 207 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 CXorf66Q5JRM2 361 aaPredicted RBP11.64□□□□□ -0.55
TRAIP-201ENST00000331456 TEX36Q5VZQ5 186 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
TRAIP-201ENST00000331456 OR2C3Q8N628 320 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 DEFB108BQ8NET1 73 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 ZCCHC14Q8WYQ9 949 aaKnown RBP11.64□□□□□ -0.55
TRAIP-201ENST00000331456 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 SMIM3Q9BZL3 60 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 NCOR2Q9Y618 2525 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 NKX6-3A6NJ46 265 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 SHISA9B4DS77 424 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 CAV2P51636 162 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 ZNF585BQ52M93 769 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 ZNF66Q6ZN08 573 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 UBAC2Q8NBM4 344 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 GAFA1Q96PS6 74 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 MAGT1Q9H0U3 335 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 C11orf1Q9H5F2 150 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 SAP30LQ9HAJ7 183 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 FAM212BQ9NTI7 297 aaPredicted RBP11.64□□□□□ -0.55
TRAIP-201ENST00000331456 PSG11Q9UQ72 335 aa11.64□□□□□ -0.55
TRAIP-201ENST00000331456 DEFB108AA8MXU0 73 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 F2RL2O00254 374 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 YPEL1O60688 119 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 PITX3O75364 302 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 IGKV1-39P01597 117 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 IGKV1D-39P04432 117 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 LPAR6P43657 344 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 LTC4SQ16873 150 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 UNQ6494/PRO21346Q6UXR6 183 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 ZNF788Q6ZQV5 615 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 EIF4E3Q8N5X7 224 aaKnown RBP11.63□□□□□ -0.55
TRAIP-201ENST00000331456 TCTEX1D2Q8WW35 142 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 YPEL2Q96QA6 119 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 HSD17B10Q99714 261 aaKnown RBP11.63□□□□□ -0.55
TRAIP-201ENST00000331456 DYNLRB1Q9NP97 96 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 LYRM2Q9NU23 88 aaPredicted RBP11.63□□□□□ -0.55
TRAIP-201ENST00000331456 CALYQ9NYX4 217 aa11.63□□□□□ -0.55
TRAIP-201ENST00000331456 RP1L1Q8IWN7 2480 aaPredicted RBP11.63□□□□□ -0.55
TRAIP-201ENST00000331456 KIAA2026Q5HYC2 2103 aa11.62□□□□□ -0.55
TRAIP-201ENST00000331456 TRGV10A0A0A0MS01 117 aa11.62□□□□□ -0.55
TRAIP-201ENST00000331456 TRAV38-1A0A0B4J264 116 aa11.62□□□□□ -0.55
TRAIP-201ENST00000331456 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms