RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR52B4Q8NGK2 314 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 GALMQ96C23 342 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 SUCNR1Q9BXA5 334 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 SHARPINQ9H0F6 387 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 OR2W1Q9Y3N9 320 aa13.61□□□□□ -0.23
PDLIM1-201ENST00000329399 CRYM-AS1A6NIL9 109 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 IFNA2P01563 188 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 IGHV2-5P01817 119 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 EGR1P18146 543 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 SRPXP78539 464 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 ATXN7L3Q14CW9 347 aaPredicted RBP13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 CMTM1Q8IZ96 169 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 H1FOOQ8IZA3 346 aaPredicted RBP13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 ASCC1Q8N9N2 400 aaKnown RBP13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 ADAD2Q8NCV1 583 aaKnown RBP13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 RAB1CQ92928 201 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 RAB18Q9NP72 206 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 OR6C3Q9NZP0 311 aa13.6□□□□□ -0.23
PDLIM1-201ENST00000329399 NKX6-3A6NJ46 265 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 DBX1A6NMT0 343 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 BET1O15155 118 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 SPINT2O43291 252 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 WNT2P09544 360 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 RCC1P18754 421 aaPredicted RBP13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 AADACP22760 399 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 ZFP36P26651 326 aaKnown RBP13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 GABRA2P47869 451 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 OR5M8Q8NGP6 311 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 TMEM230Q96A57 120 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 CYYR1Q96J86 154 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 AKR1E2Q96JD6 320 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 FXYD6Q9H0Q3 95 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 TAF9BQ9HBM6 251 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 DNHD1Q96M86 4753 aa13.59□□□□□ -0.23
PDLIM1-201ENST00000329399 TEX13DA0A0J9YY54 714 aaPredicted RBP13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 KIAA1324LA8MWY0 1029 aaPredicted RBP13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 GPR31O00270 319 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 C4BPBP20851 252 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 HTD2P86397 168 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 HERPUD1Q15011 391 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 FAM120AOSQ5T036 256 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 ZNF788Q6ZQV5 615 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 NLRC3Q7RTR2 1065 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 UXS1Q8NBZ7 420 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 ZBTB34Q8NCN2 500 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 TIMD4Q96H15 378 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 COQ2Q96H96 371 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 TMPRSS13Q9BYE2 586 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 KIF25Q9UIL4 384 aa13.58□□□□□ -0.24
PDLIM1-201ENST00000329399 PPIAL4EA0A075B759 164 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 IGKV1-6A0A0C4DH72 117 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 B4DSR2 109 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 PPIAL4DF5H284 164 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 SIGLEC5O15389 551 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 HSPA12AO43301 675 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 AVPP01185 164 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 PPIAL4FP0DN26 164 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 NFYAP23511 347 aaPredicted RBP13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 LUMP51884 338 aaPredicted RBP13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 PIGPP57054 158 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 AESQ08117 197 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 LRTM2Q8N967 370 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 OR2T35Q8NGX2 323 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 RTN4IP1Q8WWV3 396 aaPredicted RBP13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 TOMM40LQ969M1 308 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 DMRTB1Q96MA1 342 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 NAA60Q9H7X0 242 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 SLC2A9Q9NRM0 540 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 HIF1ANQ9NWT6 349 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 LPAR3Q9UBY5 353 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 PPIAL4AQ9Y536 164 aa13.57□□□□□ -0.24
PDLIM1-201ENST00000329399 ODAMA1E959 279 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 GOSR2O14653 212 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 MSMBP08118 114 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 RPS2P15880 293 aaKnown RBP13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 CEBPDP49716 269 aaPredicted RBP13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 P2RX3P56373 397 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 FXYD4P59646 89 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 SUPT4H1P63272 117 aaKnown RBP13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 BAMBIQ13145 260 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 GSG1LQ6UXU4 331 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 C1orf229Q6ZS94 237 aaPredicted RBP13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 LDLRAD3Q86YD5 345 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 SLC5A7Q9GZV3 580 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 KAAG1Q9UBP8 84 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 KCNS2Q9ULS6 477 aa13.56□□□□□ -0.24
PDLIM1-201ENST00000329399 GNRHRP30968 328 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 CD80P33681 288 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 LCN2P80188 198 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 MEF2CQ06413 473 aaPredicted RBP13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 BVESQ8NE79 360 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 DEFB108BQ8NET1 73 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 OR10V1Q8NGI7 309 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 CASTOR1Q8WTX7 329 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 CORO2AQ92828 525 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 TMEM186Q96B77 213 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 TMEM246Q9BRR3 403 aa13.55□□□□□ -0.24
PDLIM1-201ENST00000329399 TMEM160Q9NX00 188 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms