RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 DHRS13Q6UX07 377 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 NANOS1Q8WY41 292 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 MUCL1Q96DR8 90 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 RIMS4Q9H426 269 aaPredicted RBP10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 CLN8Q9UBY8 286 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 NEURL1O76050 574 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 OR2H2O95918 312 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 LHX2P50458 406 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 FABP6P51161 128 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 MRPL49Q13405 166 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 SLC10A1Q14973 349 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 HEPN1Q6WQI6 88 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 CLDND2Q8NHS1 167 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 OR4C12Q96R67 309 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 TAAR9Q96RI9 348 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 TBC1D28Q2M2D7 210 aa10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 ALKBH6Q3KRA9 238 aa10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 OR4F5Q8NH21 305 aa10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 PLPPR1Q8TBJ4 325 aa10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 OR4F4Q96R69 305 aa10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 CDX2Q99626 313 aaPredicted RBP10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 GGACTQ9BVM4 153 aa10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 LIN7CQ9NUP9 197 aaKnown RBP10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 LAMP3Q9UQV4 416 aa10.96□□□□□ -0.66
HMGCS1-201ENST00000325110 HEATR1Q9H583 2144 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 A0A1W2PPQ1 181 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 OR8G1Q15617 311 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 DCAF10Q5QP82 559 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 MRGPRDQ8TDS7 321 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 OR5P3Q8WZ94 311 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 POM121L2Q96KW2 1035 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 SCRT1Q9BWW7 348 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 TUBA4BQ9H853 241 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 HSPB1P04792 205 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 BCL2P10415 239 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 WNT5AP41221 380 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 CLDN18P56856 261 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 UBE2G2P60604 165 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 AESQ08117 197 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 ZNF383Q8NA42 475 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 RCC1LQ96I51 464 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 A0A1B0GU03 582 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 OR5B21A6NL26 309 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 CLDN34H7C241 214 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 CD55P08174 381 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 MDH2P40926 338 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 ELOBQ15370 118 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 KHDC3LQ587J8 217 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 CST9LP1Q5W188 147 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 OR1L1Q8NH94 360 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 SPSB4Q96A44 273 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 OR5B12Q96R08 314 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 RBKSQ9H477 322 aa10.95□□□□□ -0.66
HMGCS1-201ENST00000325110 SPTA1P02549 2419 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 J3QT63 122 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 WNT9BO14905 357 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 ZNF737O75373 536 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 PAX9P55771 341 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 NCR3LG1Q68D85 454 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 PCSK4Q6UW60 755 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 Q6ZSR3 168 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 HINT2Q9BX68 163 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 OR51M1Q9H341 326 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 TMEM9BQ9NQ34 198 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 MPC1Q9Y5U8 109 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 PCNX1Q96RV3 2341 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 ZNF705GA8MUZ8 300 aaPredicted RBP10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 SH2D1BO14796 132 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 DEFA6Q01524 100 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 FIP1L1Q6UN15 594 aaKnown RBP10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 FGFRL1Q8N441 504 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 OR52L2PQ8NGH6 319 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 EGLN1Q9GZT9 426 aa10.94□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A10PA6NDY2 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A18PA6NE21 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A16PA6NEW6 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A20PA6NIJ5 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A8PA6NJQ4 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A7PA6NKC0 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A22PA8MWA6 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A12PA8MX19 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A5PA8MXJ8 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A23PA8MXZ1 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 AGFG2O95081 481 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A15PP0C7V4 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A13PP0C7W8 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A14PP0C7W9 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FAM90A24PP0C7X0 464 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 PGA5P0DJD9 388 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 HNF1AP20823 631 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 FGF7P21781 194 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 LINC00205P59089 165 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 ZNF506Q5JVG8 444 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 CDPF1Q6NVV7 123 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 C1orf210Q8IVY1 113 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 SCCPDHQ8NBX0 429 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 SSX3Q99909 188 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 LRP5LA4QPB2 252 aa10.93□□□□□ -0.66
HMGCS1-201ENST00000325110 KIAA1324LA8MWY0 1029 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms