RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 SSMEM1Q8WWF3 244 aa10.67□□□□□ -0.7
CACNA1F-201ENST00000323022 CLEC7AQ9BXN2 247 aa10.67□□□□□ -0.7
CACNA1F-201ENST00000323022 ZNF275Q9NSD4 429 aaPredicted RBP10.67□□□□□ -0.7
CACNA1F-201ENST00000323022 TECRQ9NZ01 308 aaKnown RBP10.67□□□□□ -0.7
CACNA1F-201ENST00000323022 SLC6A1P30531 599 aa10.67□□□□□ -0.7
CACNA1F-201ENST00000323022 ATG4DQ86TL0 474 aaPredicted RBP10.67□□□□□ -0.7
CACNA1F-201ENST00000323022 CNTD2Q9H8S5 307 aa10.67□□□□□ -0.7
CACNA1F-201ENST00000323022 PRNDQ9UKY0 176 aa10.67□□□□□ -0.7
CACNA1F-201ENST00000323022 TMEM272A0A1B0GTI8 110 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 LINC00303Q3SY05 128 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 SPANXN1Q5VSR9 72 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 MAPK1IP1LQ8NDC0 245 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 TMEM167BQ9NRX6 74 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 CBLN4Q9NTU7 201 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 SCN3AQ9NY46 2000 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 IGHV3-11P01762 117 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 GUK1Q16774 197 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 ATP6V1FQ16864 119 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 C10orf113Q5VZT2 155 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 LIAT1Q6ZQX7 453 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 TBC1D26Q86UD7 250 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 KLF14Q8TD94 323 aaPredicted RBP10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 IGHV3-49A0A0A0MS15 119 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 RNASE1P07998 156 aaKnown RBP10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 TNFSF10P50591 281 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 C11orf87Q6NUJ2 197 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 GBGT1Q8N5D6 347 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 SRXN1Q9BYN0 137 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 LYRM2Q9NU23 88 aaPredicted RBP10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 CTSBP07858 339 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 TAS2R60P59551 318 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 IQCJQ1A5X6 159 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 TMEM106BQ9NUM4 274 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 MOB4Q9Y3A3 225 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 J3QR06 171 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 REG1AP05451 166 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 RIGQ13278 110 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 GGNBP1Q5YKI7 109 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 ZDHHC22Q8N966 263 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 PRSS22Q9GZN4 317 aa10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 AKIRIN1Q9H9L7 192 aaPredicted RBP10.66□□□□□ -0.7
CACNA1F-201ENST00000323022 IGSF23A1L1A6 192 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 M0R2Z0 102 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 P01737 135 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 SLC35E3Q7Z769 313 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 WDFY1Q8IWB7 410 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 EEF1AKMT3Q96AZ1 226 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 NAA60Q9H7X0 242 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 SRD5A3Q9H8P0 318 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 TRAV34A0A0B4J273 112 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 CST4P01036 141 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 SYT8Q8NBV8 401 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 CYB5R1Q9UHQ9 305 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 HIGD1AQ9Y241 93 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 H3BVH4 76 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 M0R3E3 92 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 SFT2D2O95562 160 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 OR8G5Q8NG78 346 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 SMIM4Q8WVI0 70 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 RAB33BQ9H082 229 aa10.65□□□□□ -0.7
CACNA1F-201ENST00000323022 LYNX1G3V0Z9 82 aa10.65□□□□□ -0.71
CACNA1F-201ENST00000323022 SAP30O75446 220 aa10.65□□□□□ -0.71
CACNA1F-201ENST00000323022 TTRP02766 147 aa10.65□□□□□ -0.71
CACNA1F-201ENST00000323022 STAG3L2P0CL84 134 aa10.65□□□□□ -0.71
CACNA1F-201ENST00000323022 LYNX1P0DP58 116 aa10.65□□□□□ -0.71
CACNA1F-201ENST00000323022 PACRGQ96M98 296 aaPredicted RBP10.65□□□□□ -0.71
CACNA1F-201ENST00000323022 MFNGO00587 321 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 RFPL3SP0C7P2 107 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 TMEM183BQ1AE95 376 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 TOLLIPQ9H0E2 274 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 KCNK15Q9H427 330 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 SLC17A5Q9NRA2 495 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 MMP24Q9Y5R2 645 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 TRIP11Q15643 1979 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 TRAV40A0A0B4J280 105 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 MFSD2BA6NFX1 497 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 MGST3O14880 152 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 GCGP01275 180 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 COTL1Q14019 142 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 CTF1Q16619 201 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 SOSTQ9BQB4 213 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 TCRBV5S2A0A599 114 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 MMP15P51511 669 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 FAM78BQ5VT40 261 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 ABHD14BQ96IU4 210 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 S4R3C0 116 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 TMEM56-RWDD3S4R434 201 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 RECKO95980 971 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 PRB1P04280 392 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 FGF8P55075 233 aaPredicted RBP10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 SNRPEP62304 92 aaKnown RBP10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 CLLU1Q5K131 121 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 ZNF841Q6ZN19 808 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 IDI2-AS1Q9NZ38 188 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 THBDP07204 575 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 GCSHP23434 173 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 ADIPOQQ15848 244 aa10.64□□□□□ -0.71
CACNA1F-201ENST00000323022 FAM209AQ5JX71 171 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms