RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GAPTQ8N292 157 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 SMIM17P0DL12 118 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 TDGF1P3P51864 188 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF506Q5JVG8 444 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 DEFB132Q7Z7B7 95 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 VASH2Q86V25 355 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 CLDND2Q8NHS1 167 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 DUSP23Q9BVJ7 150 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 LHX9Q9NQ69 397 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 TIMM9Q9Y5J7 89 aa6.18□□□□□ -1.42
SMC1A-201ENST00000322213 HIVEP2P31629 2446 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 G3V3Y1 287 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 TNFSF11O14788 317 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 AESQ08117 197 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR10V1Q8NGI7 309 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 NRSN2Q9GZP1 204 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 TRBV5-7A0A0A0MS05 114 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 TRAV14DV4A0A0A6YYC5 116 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 A0A1B0GW64 132 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 HLA-DRB1P01911 266 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 PRRX1P54821 245 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 MRPL54Q6P161 138 aaKnown RBP6.17□□□□□ -1.42
SMC1A-201ENST00000322213 MS4A4AQ96JQ5 239 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 PARLQ9H300 379 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 DNPH1O43598 174 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 SNCGO76070 127 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 FAM87AP0C7U9 286 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
SMC1A-201ENST00000322213 EDDM3AQ14507 147 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 IL2RAP01589 272 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 SLC25A5P05141 298 aaKnown RBP6.17□□□□□ -1.42
SMC1A-201ENST00000322213 GPX7Q96SL4 187 aaPredicted RBP6.17□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF665Q9H7R5 613 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 A6NNC1 897 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 SMIM13P0DJ93 91 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 ARL14EPLP0DKL9 152 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 NMUP48645 174 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 RRADP55042 308 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR8I2Q8N0Y5 310 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR4S2Q8NH73 311 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 MVB12AQ96EY5 273 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 A0A0U1RQV5 110 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR4C46A6NHA9 309 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 SLC17A3O00476 420 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 FGF16O43320 207 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 VSIG8P0DPA2 414 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 CLDN18P56856 261 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR8B3Q8NGG8 313 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR13G1Q8NGZ3 307 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 MRGPRFQ96AM1 343 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 CDX2Q99626 313 aaPredicted RBP6.17□□□□□ -1.42
SMC1A-201ENST00000322213 ERRFI1Q9UJM3 462 aaPredicted RBP6.17□□□□□ -1.42
SMC1A-201ENST00000322213 TRAV39A0A0B4J263 110 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 KLF7O75840 302 aaPredicted RBP6.17□□□□□ -1.42
SMC1A-201ENST00000322213 IGHV2-5P01817 119 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 CFIP05156 583 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 GZMBP10144 247 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 F2RP25116 425 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 PSMB2P49721 201 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 SNAI3Q3KNW1 292 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 TMEM108Q6UXF1 575 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR52M1Q8NGK5 317 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR10S1Q8NGN2 331 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 OR11L1Q8NGX0 322 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 GPR27Q9NS67 375 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 GRIFINA4D1Z8 144 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 LEPROTL1O95214 131 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 B4GALT1P15291 398 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 UBE2L3P68036 154 aaKnown RBP6.17□□□□□ -1.42
SMC1A-201ENST00000322213 MUCL1Q96DR8 90 aa6.17□□□□□ -1.42
SMC1A-201ENST00000322213 NKX6-3A6NJ46 265 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 NTN1O95631 604 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 MLF2Q15773 248 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 SCGB1D4Q6XE38 83 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 MUC4Q99102 2169 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 RAI1Q7Z5J4 1906 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ENSAO43768 121 aaKnown RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 CER1O95813 267 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 GRPP07492 148 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 UQCRFS1P47985 274 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 MFAP2P55001 183 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 TCL1AP56279 114 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 RPS15P62841 145 aaKnown RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ACSM6Q6P461 480 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OR5A1Q8NGJ0 315 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OR1K1Q8NGR3 316 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 SMOC1Q9H4F8 434 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 LAMTOR2Q9Y2Q5 125 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 RNF222A6NCQ9 220 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 NDUFB4O95168 129 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 OCIAD2Q56VL3 154 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ZNF766Q5HY98 468 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 DERL1Q9BUN8 251 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 PRDM13Q9H4Q3 707 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 JKAMPQ9P055 326 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 CKS1BP61024 79 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 RPS4XP62701 263 aaKnown RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 C10orf91Q5T1B1 145 aa6.16□□□□□ -1.42
SMC1A-201ENST00000322213 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-201ENST00000322213 ATG4DQ86TL0 474 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms