RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 IL22RA2Q969J5 263 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 GP6Q9HCN6 339 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 SCAF4O95104 1147 aaKnown RBP14.72□□□□□ -0.05
COL9A1-201ENST00000320755 IFNA4P05014 189 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 IGHV1-2P23083 117 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 CCL11P51671 97 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 PSG7Q13046 419 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 MRPL49Q13405 166 aaKnown RBP14.72□□□□□ -0.05
COL9A1-201ENST00000320755 ZNF585BQ52M93 769 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 OR8G2PQ6IF36 304 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 ZNF880Q6PDB4 577 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 LILRB2Q8N423 598 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 TRIB1Q96RU8 372 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 CABLES2Q9BTV7 478 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 RPRMQ9NS64 109 aa14.72□□□□□ -0.05
COL9A1-201ENST00000320755 KIAA1324LA8MWY0 1029 aaPredicted RBP14.71□□□□□ -0.05
COL9A1-201ENST00000320755 SH2D1BO14796 132 aa14.71□□□□□ -0.05
COL9A1-201ENST00000320755 KRASP01116 189 aa14.71□□□□□ -0.05
COL9A1-201ENST00000320755 OR8G1Q15617 311 aa14.71□□□□□ -0.05
COL9A1-201ENST00000320755 ZNF497Q6ZNH5 498 aa14.71□□□□□ -0.05
COL9A1-201ENST00000320755 DRAM1Q8N682 238 aa14.71□□□□□ -0.05
COL9A1-201ENST00000320755 TPRX1Q8N7U7 411 aa14.71□□□□□ -0.05
COL9A1-201ENST00000320755 OR1L1Q8NH94 360 aa14.71□□□□□ -0.05
COL9A1-201ENST00000320755 RAB40CQ96S21 281 aa14.71□□□□□ -0.05
COL9A1-201ENST00000320755 TRBV6-6A0A0A6YYG2 114 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 LRP5LA4QPB2 252 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 PSPNO60542 156 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 DFFBO76075 338 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 AGAP20933 346 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 MPV17P39210 176 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 OR3A1P47881 315 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 ELLP55199 621 aaPredicted RBP14.71□□□□□ -0.06
COL9A1-201ENST00000320755 SOX8P57073 446 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 DLK1P80370 383 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 RNF212Q495C1 297 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 POLDIP2Q9Y2S7 368 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 GVINP1Q7Z2Y8 2422 aa14.71□□□□□ -0.06
COL9A1-201ENST00000320755 C5orf52A6NGY3 159 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 MMP9P14780 707 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 RAB11AP62491 216 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 AESQ08117 197 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 ZNF816Q0VGE8 651 aaPredicted RBP14.7□□□□□ -0.06
COL9A1-201ENST00000320755 CHD3Q12873 2000 aaKnown RBP14.7□□□□□ -0.06
COL9A1-201ENST00000320755 M0R296 226 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 PAX6P26367 422 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 TGFBR3Q03167 851 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 ZNF665Q9H7R5 613 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 TUBA4BQ9H853 241 aa14.7□□□□□ -0.06
COL9A1-201ENST00000320755 RAMP3O60896 148 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 RAB2AP61019 212 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 CLDND2Q8NHS1 167 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 HMGB3O15347 200 aaKnown RBP14.69□□□□□ -0.06
COL9A1-201ENST00000320755 NKX2-8O15522 239 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 FABP6P51161 128 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 LINC00205P59089 165 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 FGFRL1Q8N441 504 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 OR52L2PQ8NGH6 319 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 RFESDQ8TAC1 157 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 PLPPR2Q96GM1 343 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 CLDN1O95832 211 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 HAND1O96004 215 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 IL2RGP31785 369 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 BTNL3Q6UXE8 466 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 NIPSNAP3BQ9BS92 247 aa14.69□□□□□ -0.06
COL9A1-201ENST00000320755 A0A1B0GW64 132 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 BTBD17A6NE02 478 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 S100A9P06702 114 aaKnown RBP14.68□□□□□ -0.06
COL9A1-201ENST00000320755 PGA5P0DJD9 388 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 G6PCP35575 357 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 LTC4SQ16873 150 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 NCMAPQ5T1S8 102 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 HAPLN4Q86UW8 402 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 TMEM178AQ8NBL3 297 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 KLF14Q8TD94 323 aaPredicted RBP14.68□□□□□ -0.06
COL9A1-201ENST00000320755 OR2D2Q9H210 308 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 UNKLQ9H9P5 680 aaKnown RBP14.68□□□□□ -0.06
COL9A1-201ENST00000320755 MSL2Q9HCI7 577 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 LIN7CQ9NUP9 197 aaKnown RBP14.68□□□□□ -0.06
COL9A1-201ENST00000320755 KCNIP1Q9NZI2 227 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 INTS1Q8N201 2190 aaKnown RBP14.68□□□□□ -0.06
COL9A1-201ENST00000320755 LAMA5O15230 3695 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 IGHV3-43A0A0B4J1X8 118 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 DEFB108AA8MXU0 73 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.68□□□□□ -0.06
COL9A1-201ENST00000320755 IGHV3-43DP0DP04 118 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 ERVK11-1P61568 191 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 PRAMEF6Q5VXH4 476 aa14.68□□□□□ -0.06
COL9A1-201ENST00000320755 RBMXL2O75526 392 aaKnown RBP14.67□□□□□ -0.06
COL9A1-201ENST00000320755 MDH2P40926 338 aaKnown RBP14.67□□□□□ -0.06
COL9A1-201ENST00000320755 GABRA2P47869 451 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 SPINK9Q5DT21 86 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 SNIP1Q8TAD8 396 aaKnown RBP14.67□□□□□ -0.06
COL9A1-201ENST00000320755 MRGPRDQ8TDS7 321 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 OR4C12Q96R67 309 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 TMEM9BQ9NQ34 198 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 UBE2L5PA0A1B0GUS4 154 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 CD55P08174 381 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 ZNF787Q6DD87 383 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 SSX7Q7RTT5 188 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 KDF1Q8NAX2 398 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms