RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 OR4A8P0C604 315 aa13.25□□□□□ -0.29
SHROOM1-201ENST00000319854 RND2P52198 227 aa13.25□□□□□ -0.29
SHROOM1-201ENST00000319854 HERV-K104P61576 105 aa13.25□□□□□ -0.29
SHROOM1-201ENST00000319854 TRIP6Q15654 476 aaKnown RBP13.25□□□□□ -0.29
SHROOM1-201ENST00000319854 NOL4LQ96MY1 436 aaPredicted RBP13.25□□□□□ -0.29
SHROOM1-201ENST00000319854 ZNF286AQ9HBT8 521 aa13.25□□□□□ -0.29
SHROOM1-201ENST00000319854 CELA3BP08861 270 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 SCTP09683 121 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 GNMTQ14749 295 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 PLA2G2CQ5R387 149 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 BEND2Q8NDZ0 799 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 HIST1H2AAQ96QV6 131 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 CDH20Q9HBT6 801 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 A0A1B0GU03 582 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 KLRC4-KLRK1H3BQV0 150 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 CLDN34H7C241 214 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 TMEM50AO95807 157 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 ECI1P42126 302 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 DYNLT3P51808 116 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 RAB4BP61018 213 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 P2RY6Q15077 328 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 MPV17LQ2QL34 196 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 CXorf66Q5JRM2 361 aaPredicted RBP13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 LRTM2Q8N967 370 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 ACTR3CQ9C0K3 210 aaPredicted RBP13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 MTCH1Q9NZJ7 389 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 GNG13Q9P2W3 67 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 ADGRG4Q8IZF6 3080 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 ARHGAP21Q5T5U3 1957 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 LYZL6O75951 148 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 CD46P15529 392 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 CLN3Q13286 438 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 ZDHHC23Q8IYP9 409 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 TMEM252Q8N6L7 170 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 IL1F10Q8WWZ1 152 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 CABLES2Q9BTV7 478 aa13.24□□□□□ -0.29
SHROOM1-201ENST00000319854 SSSCA1O60232 199 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 PLA2G5P39877 138 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 ERVS71-1P61550 626 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 ZNF266Q14584 549 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 PRSS8Q16651 343 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 ZNF766Q5HY98 468 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 MYPOPQ86VE0 399 aaPredicted RBP13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 RNASEH2CQ8TDP1 164 aaKnown RBP13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 REPIN1Q9BWE0 567 aaKnown RBP13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 SPRR3Q9UBC9 169 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 ANKRD11Q6UB99 2663 aaPredicted RBP13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 CHD3Q12873 2000 aaKnown RBP13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 CD300LBA8K4G0 201 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 IDH3GP51553 393 aaPredicted RBP13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 CLEC12BQ2HXU8 276 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 CNEP1R1Q8N9A8 125 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 OR1P1Q8NH06 330 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 CBLN4Q9NTU7 201 aa13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 KLF13Q9Y2Y9 288 aaPredicted RBP13.23□□□□□ -0.29
SHROOM1-201ENST00000319854 IGKV3D-15A0A087WSY6 115 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 ZFP92A6NM28 416 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 TRAPPC2LH3BP13 241 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 RHBDL1O75783 438 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 DAZAP2Q15038 168 aaPredicted RBP13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 Q6ZSR3 168 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 MDP1Q86V88 176 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 CMTM1Q8IZ96 169 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 LGI3Q8N145 548 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 TMEM45BQ96B21 275 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 PRDM14Q9GZV8 571 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 TRGV5A0A0B4J1U4 118 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 LOC102723971A0A1B0GUV8 181 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 SLC22A20A6NK97 555 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 PITX3O75364 302 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 ZNF25P17030 456 aaPredicted RBP13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 WNT5AP41221 380 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 NECAP1Q8NC96 275 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 OR8G5Q8NG78 346 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 APOBEC3DQ96AK3 386 aaPredicted RBP13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 WFIKKN1Q96NZ8 548 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 MRPS18CQ9Y3D5 142 aaKnown RBP13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 COL27A1Q8IZC6 1860 aaPredicted RBP13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 TRBV24-1A0A075B6N3 115 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 CYB5R3P00387 301 aaPredicted RBP13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 KRTAP27-1Q3LI81 207 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 RTL6Q6ICC9 239 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 SNIP1Q8TAD8 396 aaKnown RBP13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 MUC6Q6W4X9 2439 aa13.22□□□□□ -0.29
SHROOM1-201ENST00000319854 HEATR1Q9H583 2144 aaKnown RBP13.21□□□□□ -0.29
SHROOM1-201ENST00000319854 ZNF154Q13106 437 aa13.21□□□□□ -0.29
SHROOM1-201ENST00000319854 SYT3Q9BQG1 590 aa13.21□□□□□ -0.29
SHROOM1-201ENST00000319854 ZNF665Q9H7R5 613 aa13.21□□□□□ -0.29
SHROOM1-201ENST00000319854 GZMHP20718 246 aa13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 SOX8P57073 446 aa13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 PPA1Q15181 289 aa13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 TEX38Q6PEX7 206 aa13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 FAM180AQ6UWF9 173 aa13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 CXorf67Q86X51 503 aaPredicted RBP13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 POM121L2Q96KW2 1035 aa13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 GAB2Q9UQC2 676 aa13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 INTS1Q8N201 2190 aaKnown RBP13.21□□□□□ -0.3
SHROOM1-201ENST00000319854 SPTA1P02549 2419 aa13.2□□□□□ -0.3
SHROOM1-201ENST00000319854 XKRY2A2RUG3 117 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms