RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 AESQ08117 197 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 KIR2DS1Q14954 304 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 RNF212Q495C1 297 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 C9orf152Q5JTZ5 239 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 C11orf53Q8IXP5 236 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 OR2Z1Q8NG97 314 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 MBD3L2Q8NHZ7 208 aaPredicted RBP10.48□□□□□ -0.73
RNF4-201ENST00000314289 TCEAL7Q9BRU2 100 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 POLDIP2Q9Y2S7 368 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 RBM7Q9Y580 266 aaKnown RBP10.48□□□□□ -0.73
RNF4-201ENST00000314289 JTBO76095 146 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 SULT1A1P50225 295 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 C18orf12Q96KH6 178 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 TREM2Q9NZC2 230 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 PPP1R3CQ9UQK1 317 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 DEDDO75618 318 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 ZNF16P17020 682 aaPredicted RBP10.47□□□□□ -0.73
RNF4-201ENST00000314289 PAX6P26367 422 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 SNCAP37840 140 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 PRR30Q53SZ7 412 aaPredicted RBP10.47□□□□□ -0.73
RNF4-201ENST00000314289 ZNF695Q8IW36 515 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 LGI3Q8N145 548 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 CCDC71LQ8N9Z2 235 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 PLPPR2Q96GM1 343 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 PRRX2Q99811 253 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 FAM212BQ9NTI7 297 aaPredicted RBP10.47□□□□□ -0.73
RNF4-201ENST00000314289 SLC25A15Q9Y619 301 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 LRBAP50851 2863 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 YIF1AO95070 293 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 CNOT4O95628 575 aaKnown RBP10.47□□□□□ -0.73
RNF4-201ENST00000314289 PTBP3O95758 552 aaKnown RBP10.47□□□□□ -0.73
RNF4-201ENST00000314289 HAND1O96004 215 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 EPHA1P21709 976 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 PMELP40967 661 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 CEBPGP53567 150 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 HLA-DRB3P79483 266 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 IL13RA2Q14627 380 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 ZNF600Q6ZNG1 722 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 BEND4Q6ZU67 534 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 SUCNR1Q9BXA5 334 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 RNF150Q9ULK6 438 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 AP4M1O00189 453 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 IGHV2-70P01814 119 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 UCP3P55916 312 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 ZNF718Q3SXZ3 478 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 HSD17B11Q8NBQ5 300 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 TMEM222Q9H0R3 208 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 SH3BGRL3Q9H299 93 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 KCNS2Q9ULS6 477 aa10.47□□□□□ -0.73
RNF4-201ENST00000314289 PUS1Q9Y606 427 aaKnown RBP eCLIP10.47□□□□□ -0.73
RNF4-201ENST00000314289 MKRN2OSH3BPM6 223 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 SH2D1BO14796 132 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 ADAM20O43506 726 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 IGHV2-5P01817 119 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 NHLH2Q02577 135 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 P2RY6Q15077 328 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 HMGN3Q15651 99 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 LTC4SQ16873 150 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 C1orf185Q5T7R7 199 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 WDR82Q6UXN9 313 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 C1orf162Q8NEQ5 155 aaPredicted RBP10.46□□□□□ -0.73
RNF4-201ENST00000314289 TUBD1Q9UJT1 453 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 POMT1Q9Y6A1 747 aa10.46□□□□□ -0.73
RNF4-201ENST00000314289 TUSC2O75896 110 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 IGLV1-44P01699 117 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 OMGP23515 440 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 CXorf66Q5JRM2 361 aaPredicted RBP10.46□□□□□ -0.74
RNF4-201ENST00000314289 ZNF324BQ6AW86 544 aaPredicted RBP10.46□□□□□ -0.74
RNF4-201ENST00000314289 FAM180AQ6UWF9 173 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 SPACA3Q8IXA5 215 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 RFESDQ8TAC1 157 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 DCTN5Q9BTE1 182 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 KCNJ16Q9NPI9 418 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 ZDHHC8Q9ULC8 765 aa10.46□□□□□ -0.74
RNF4-201ENST00000314289 IGHV3OR15-7A0A075B7D8 119 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 J3QW42 95 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 PGLYRP1O75594 196 aaPredicted RBP10.45□□□□□ -0.74
RNF4-201ENST00000314289 RPS10P46783 165 aaKnown RBP10.45□□□□□ -0.74
RNF4-201ENST00000314289 FAM201AQ5SY85 155 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 ZNF497Q6ZNH5 498 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 OR1L1Q8NH94 360 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 PFDN5Q99471 154 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 WASF3Q9UPY6 502 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 RCL1Q9Y2P8 373 aaKnown RBP10.45□□□□□ -0.74
RNF4-201ENST00000314289 OR2W1Q9Y3N9 320 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 MMP24Q9Y5R2 645 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 DOCK11Q5JSL3 2073 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 H7C1Q1 480 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 SPRY3O43610 288 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 CEACAM6P40199 344 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 GABRA2P47869 451 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 RAB2AP61019 212 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 EDDM3AQ14507 147 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 Q6ZS49 121 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 LINC00596Q86U02 117 aa10.45□□□□□ -0.74
RNF4-201ENST00000314289 IGHV3-43A0A0B4J1X8 118 aa10.44□□□□□ -0.74
RNF4-201ENST00000314289 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.44□□□□□ -0.74
RNF4-201ENST00000314289 IGHV3-13P01766 116 aa10.44□□□□□ -0.74
RNF4-201ENST00000314289 IGHV3-7P01780 117 aa10.44□□□□□ -0.74
RNF4-201ENST00000314289 GAPDHP04406 335 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms