RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 P2RX4Q99571 388 aa13.37□□□□□ -0.27
SLC39A1-201ENST00000310483 PCGF1Q9BSM1 259 aa13.37□□□□□ -0.27
SLC39A1-201ENST00000310483 WDR54Q9H977 334 aa13.37□□□□□ -0.27
SLC39A1-201ENST00000310483 ST8SIA5O15466 376 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 IFNA10P01566 189 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 PAX1P15863 534 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 RPL23P62829 140 aaKnown RBP13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 Q3ZCU0 254 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 ZNF585BQ52M93 769 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 OR10V1Q8NGI7 309 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 WFIKKN1Q96NZ8 548 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 PSMG3Q9BT73 122 aaPredicted RBP13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 SLC25A22Q9H936 323 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 DEPPQ9NTK1 212 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 NAT8Q9UHE5 227 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
SLC39A1-201ENST00000310483 PINLYPA6NC86 204 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 A8MWP6 167 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 TGOLN2O43493 480 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 IL18BPO95998 194 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 DEFA4P12838 97 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 COL19A1Q14993 1142 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 TMEM241Q24JQ0 296 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 RIPPLY2Q5TAB7 128 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 ZNF66Q6ZN08 573 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 CTDSP1Q9GZU7 261 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 SLC39A9Q9NUM3 307 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 A0A1W2PPQ1 181 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 DVL1O14640 695 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 DNPH1O43598 174 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 RHBDL1O75783 438 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 IGFBP4P22692 258 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 GALR1P47211 349 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 SRYQ05066 204 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 USF2Q15853 346 aaPredicted RBP13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 ACSM6Q6P461 480 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 OR51G1Q8NGK1 321 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 TMEM37Q8WXS4 190 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 TAF15Q92804 592 aaKnown RBP eCLIP13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 SGCZQ96LD1 299 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 KCNS2Q9ULS6 477 aa13.35□□□□□ -0.27
SLC39A1-201ENST00000310483 MKRN2OSH3BPM6 223 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 P04436 131 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 FGF7P21781 194 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 S100GP29377 79 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 MEF2BQ02080 365 aaPredicted RBP13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 BSXQ3C1V8 233 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 CYP2G1PQ6ZSU1 146 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 OR5T1Q8NG75 326 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 KCNE4Q8WWG9 221 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 DLL3Q9NYJ7 618 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 WDR1O75083 606 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 FGF5P12034 268 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 SLC25A6P12236 298 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 SERF2P84101 59 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 SLC38A11Q08AI6 406 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 SSX2Q16385 188 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 TGIF2LXQ8IUE1 241 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 SAXO1Q8IYX7 474 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 FUT9Q9Y231 359 aa13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 RBM7Q9Y580 266 aaKnown RBP13.34□□□□□ -0.27
SLC39A1-201ENST00000310483 MED12LQ86YW9 2145 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 TNRC6BQ9UPQ9 1833 aaKnown RBP13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 KBTBD11O94819 623 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 HBG1P69891 147 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 HBG2P69892 147 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 Q0VFX4 171 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 DBX2Q6ZNG2 339 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 PYGO2Q9BRQ0 406 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 PARLQ9H300 379 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 RNF150Q9ULK6 438 aa13.33□□□□□ -0.27
SLC39A1-201ENST00000310483 FAM186AA6NE01 2351 aa13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 IGHV3-64DA0A0J9YX35 117 aa13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 H7BYZ3 331 aa13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 CYTIPO60759 359 aa13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 MRPL33O75394 65 aaKnown RBP13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 IFNA1P01562 189 aa13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 GDF1P27539 372 aa13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 GNB2P62879 340 aa13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 FAM53AQ6NSI3 398 aaPredicted RBP13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 RNASEH2CQ8TDP1 164 aaKnown RBP13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 SAP25Q8TEE9 199 aa13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 LSM10Q969L4 123 aaKnown RBP13.33□□□□□ -0.28
SLC39A1-201ENST00000310483 PPP5D1E7EU14 171 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 OR4A8P0C604 315 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 BMP5P22003 454 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 OR4F5Q8NH21 305 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 OR4F4Q96R69 305 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 C2orf88Q9BSF0 95 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 ZNF576Q9H609 170 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 AURKAIP1Q9NWT8 199 aaPredicted RBP13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 TNRC6AQ8NDV7 1962 aaKnown RBP13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 EREGO14944 169 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 CLDN1O95832 211 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 IDH3GP51553 393 aaPredicted RBP13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 NUBP1P53384 320 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 FAM58AQ8N1B3 248 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 OR2Y1Q8NGV0 311 aa13.32□□□□□ -0.28
SLC39A1-201ENST00000310483 AGMATQ9BSE5 352 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms