RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TCL1AP56279 114 aa11.48□□□□□ -0.57
SNED1-201ENST00000310397 C1orf53Q5VUE5 145 aa11.48□□□□□ -0.57
SNED1-201ENST00000310397 C1orf174Q8IYL3 243 aa11.48□□□□□ -0.57
SNED1-201ENST00000310397 NRTNQ99748 197 aa11.48□□□□□ -0.57
SNED1-201ENST00000310397 IGKV1D-16P01601 117 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
SNED1-201ENST00000310397 TMEM92Q6UXU6 159 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 COL25A1Q9BXS0 654 aaPredicted RBP11.47□□□□□ -0.57
SNED1-201ENST00000310397 LINC01565O15544 149 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 MEOX1P50221 254 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 ZNF83P51522 516 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 RPL24P83731 157 aaKnown RBP11.47□□□□□ -0.57
SNED1-201ENST00000310397 IGHV3-43A0A0B4J1X8 118 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 IGHV3-43DP0DP04 118 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 CEACAM3P40198 252 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 ZNF385CQ66K41 422 aaPredicted RBP11.47□□□□□ -0.57
SNED1-201ENST00000310397 TCF20Q9UGU0 1960 aaKnown RBP11.47□□□□□ -0.57
SNED1-201ENST00000310397 ZNF721Q8TF20 911 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 C5orf66Q9H5L9 145 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 UQCR10Q9UDW1 63 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 TRAV38-1A0A0B4J264 116 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A10PA6NDY2 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A18PA6NE21 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A16PA6NEW6 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A20PA6NIJ5 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A8PA6NJQ4 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A7PA6NKC0 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A22PA8MWA6 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A12PA8MX19 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A5PA8MXJ8 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A23PA8MXZ1 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A26D6RGX4 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A15PP0C7V4 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A13PP0C7W8 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A14PP0C7W9 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FAM90A24PP0C7X0 464 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 FGF12P61328 243 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 PLPPR5Q32ZL2 321 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 IER2Q9BTL4 223 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 LHX9Q9NQ69 397 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 TRPM7Q96QT4 1865 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 K7ESF4 209 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 MYF5P13349 255 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 RSG1Q9BU20 258 aa11.47□□□□□ -0.57
SNED1-201ENST00000310397 M0QZ24 198 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 HLA-DQA1P01909 254 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 CD74P04233 296 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 CACNA1HO95180 2353 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 MS4A18H0YCH9 400 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 SYNGR1O43759 233 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 GLIPR1P48060 266 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 NXPH1P58417 271 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 MS4A18Q3C1V0 323 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 MRPL54Q6P161 138 aaKnown RBP11.46□□□□□ -0.57
SNED1-201ENST00000310397 HDHD3Q9BSH5 251 aaPredicted RBP11.46□□□□□ -0.57
SNED1-201ENST00000310397 ELOVL1Q9BW60 279 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 WDR54Q9H977 334 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 CDC42EP3Q9UKI2 254 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 LYZL6O75951 148 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 GABRA6Q16445 453 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 OR2M3Q8NG83 312 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 NPIPB13A6NJU9 1138 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 NPIPB4C9JG80 1138 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 CDIPTO14735 213 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 LIFP15018 202 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 G6PCP35575 357 aa11.46□□□□□ -0.57
SNED1-201ENST00000310397 EML2O95834 649 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 COL9A1P20849 921 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 HYAL1Q12794 435 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 C10orf113Q5VZT2 155 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 GPR35Q9HC97 309 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 GGACTQ9BVM4 153 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 A8MWL6 223 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 GNB2P62879 340 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 OR1K1Q8NGR3 316 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 OR1L8Q8NGR8 309 aa11.46□□□□□ -0.58
SNED1-201ENST00000310397 C3orf80F5H4A9 247 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 SLC23A3Q6PIS1 610 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 HSPB9Q9BQS6 159 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 LYZP61626 148 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 MELTFP08582 738 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 CARHSP1Q9Y2V2 147 aaKnown RBP11.45□□□□□ -0.58
SNED1-201ENST00000310397 GAB4Q2WGN9 574 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 CISD1Q9NZ45 108 aaKnown RBP11.45□□□□□ -0.58
SNED1-201ENST00000310397 ONECUT1Q9UBC0 465 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 DTX4Q9Y2E6 619 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 FOXS1O43638 330 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 MFAP2P55001 183 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 HERVK_113P61574 105 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 TMEM116Q8NCL8 245 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 TMEM52Q8NDY8 209 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 C1QL1O75973 258 aa11.45□□□□□ -0.58
SNED1-201ENST00000310397 RPP25Q9BUL9 199 aaKnown RBP11.45□□□□□ -0.58
SNED1-201ENST00000310397 TRBV9A0A0B4J1U6 114 aa11.44□□□□□ -0.58
SNED1-201ENST00000310397 TCF21O43680 179 aa11.44□□□□□ -0.58
SNED1-201ENST00000310397 CSN3P07498 182 aa11.44□□□□□ -0.58
SNED1-201ENST00000310397 CEACAM21Q3KPI0 293 aa11.44□□□□□ -0.58
SNED1-201ENST00000310397 FZR1Q9UM11 496 aa11.44□□□□□ -0.58
SNED1-201ENST00000310397 RECKO95980 971 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms