RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 CD200P41217 278 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 DSCR9P59020 149 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 DLK1P80370 383 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 TNFAIP6P98066 277 aaPredicted RBP6.88□□□□□ -1.31
CHD6-201ENST00000309279 GPR50Q13585 617 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 OR8G1Q15617 311 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 TRAM1Q15629 374 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 SPRNQ5BIV9 151 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 COMMD2Q86X83 199 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 ZNF676Q8N7Q3 588 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 BOLLQ8N9W6 283 aaKnown RBP6.88□□□□□ -1.31
CHD6-201ENST00000309279 OR10AD1Q8NGE0 317 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 OR51A4Q8NGJ6 313 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 OR52I2Q8NH67 350 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 C12orf43Q96C57 262 aaKnown RBP6.88□□□□□ -1.31
CHD6-201ENST00000309279 PGLYRP3Q96LB9 341 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 ELOVL1Q9BW60 279 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 TLNRD1Q9H1K6 362 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 DNAJC4Q9NNZ3 241 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 NIT2Q9NQR4 276 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 DLL4Q9NR61 685 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 GPR173Q9NS66 373 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 GLS2Q9UI32 602 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 HHLA2Q9UM44 414 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 ZANQ9Y493 2812 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 IGHV1-69-2A0A0G2JMI3 117 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ZNF850A8MQ14 1090 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 F5H5P2 479 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 NRASP01111 189 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 CSF3P09919 207 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 SERPINA2P20848 420 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 GABRA5P31644 462 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 CDX1P47902 265 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 EMX1Q04741 257 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 MLLT11Q13015 90 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 PRDX4Q13162 271 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 DGUOKQ16854 277 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 CEACAM21Q3KPI0 293 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 RNF212Q495C1 297 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 FAM90A2PQ658T7 463 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ZNF841Q6ZN19 808 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 SATL1Q86VE3 508 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 MUC20Q8N307 709 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 ZNF525Q8N782 197 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 OR5H6Q8NGV6 325 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 OR10AC1Q8NH08 325 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 C2CD4CQ8TF44 421 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ITLN1Q8WWA0 313 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 OR5P3Q8WZ94 311 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 RGP1Q92546 391 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 RDH5Q92781 318 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 GHSRQ92847 366 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ADAT1Q9BUB4 502 aaKnown RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 COMMD4Q9H0A8 199 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ISYNA1Q9NPH2 558 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ACOT13Q9NPJ3 140 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 HIVEP1P15822 2718 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 SHISA3A0PJX4 238 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 VWC2LB2RUY7 222 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 SULT1C2O00338 296 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 LMX1BO60663 402 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 EIF3GO75821 320 aaKnown RBP eCLIP6.87□□□□□ -1.31
CHD6-201ENST00000309279 CNIH1O95406 144 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 H2AFB1P0C5Y9 115 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 CELP19835 753 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 RPS11P62280 158 aaKnown RBP eCLIP6.87□□□□□ -1.31
CHD6-201ENST00000309279 CLEC12BQ2HXU8 276 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ZNF181Q2M3W8 571 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 LY6G6FQ5SQ64 297 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 DMRTA1Q5VZB9 504 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 WDR25Q64LD2 544 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 HIST2H2BDQ6DRA6 164 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ZNF773Q6PK81 442 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 CD164L2Q6UWJ8 174 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ARRDC1Q8N5I2 433 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 PARP16Q8N5Y8 322 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 LFNGQ8NES3 379 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 WFDC11Q8NEX6 87 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 OR5A2Q8NGI9 324 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 Q8TCH9 128 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 GPR148Q8TDV2 347 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 C10orf105Q8TEF2 133 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 HPSE2Q8WWQ2 592 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 PP6455Q8WZ26 134 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 FAM168AQ92567 244 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 ADAT3Q96EY9 351 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 MRPS26Q9BYN8 205 aaKnown RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 CHST5Q9GZS9 411 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 FGF23Q9GZV9 251 aaPredicted RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 NLKQ9UBE8 527 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 MRPS28Q9Y2Q9 187 aaKnown RBP6.87□□□□□ -1.31
CHD6-201ENST00000309279 V9GYY9 64 aa6.87□□□□□ -1.31
CHD6-201ENST00000309279 YLPM1P49750 1951 aaKnown RBP6.86□□□□□ -1.31
CHD6-201ENST00000309279 ACANP16112 2415 aa6.86□□□□□ -1.31
CHD6-201ENST00000309279 TRBV5-5A0A0J9YX44 114 aa6.86□□□□□ -1.31
CHD6-201ENST00000309279 SMIM31A0A1B0GVY4 71 aa6.86□□□□□ -1.31
CHD6-201ENST00000309279 PSMB11A5LHX3 300 aa6.86□□□□□ -1.31
CHD6-201ENST00000309279 A6NIN4 97 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms