RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 IL3RAP26951 378 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 BLVRBP30043 206 aaPredicted RBP15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 F2RL1P55085 397 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 CLDN12P56749 244 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 GABARAPL2P60520 117 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 LSAMPQ13449 338 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 CD200R1LQ6Q8B3 271 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 OR4X2Q8NGF9 303 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 HDHD3Q9BSH5 251 aaPredicted RBP15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 ABHD14AQ9BUJ0 271 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 IFI27L2Q9H2X8 130 aa15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 LIN7CQ9NUP9 197 aaKnown RBP15.62■□□□□ 0.09
PDZRN3-202ENST00000308537 ARL6IP5O75915 188 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 MOSP00540 346 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 PRB2P02812 416 aaPredicted RBP15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 CALRP27797 417 aaKnown RBP15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 GPR12P47775 334 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 ZNF833PQ6ZTB9 187 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 C18orf65Q6ZTR6 163 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 ZNF367Q7RTV3 350 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 STPG2Q8N412 459 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 OR51D1Q8NGF3 324 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 RITA1Q96K30 269 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 S1PR3Q99500 378 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 ZNF251Q9BRH9 671 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 PARP12Q9H0J9 701 aaKnown RBP15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 KCNIP1Q9NZI2 227 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 AK3Q9UIJ7 227 aa15.61■□□□□ 0.09
PDZRN3-202ENST00000308537 ARSBP15848 533 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 RANBP1P43487 201 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 CFHR3Q02985 330 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 PLAC9Q5JTB6 97 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 SLC35E3Q7Z769 313 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 CHPT1Q8WUD6 406 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 PHF21AQ96BD5 680 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 NABP2Q9BQ15 211 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 HSPB9Q9BQS6 159 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 MRPL20Q9BYC9 149 aaKnown RBP15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 NDUFB11Q9NX14 153 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 HSF4Q9ULV5 492 aa15.6■□□□□ 0.09
PDZRN3-202ENST00000308537 SERPINE3A8MV23 424 aa15.59■□□□□ 0.09
PDZRN3-202ENST00000308537 OR3A3P47888 321 aa15.59■□□□□ 0.09
PDZRN3-202ENST00000308537 FAM3DQ96BQ1 224 aa15.59■□□□□ 0.09
PDZRN3-202ENST00000308537 GALMQ96C23 342 aa15.59■□□□□ 0.09
PDZRN3-202ENST00000308537 AGMATQ9BSE5 352 aa15.59■□□□□ 0.09
PDZRN3-202ENST00000308537 PLGRKTQ9HBL7 147 aa15.59■□□□□ 0.09
PDZRN3-202ENST00000308537 SAA2-SAA4A0A096LPE2 208 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 NCBP2LA6PVI3 153 aaKnown RBP15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 SAA2P0DJI9 122 aaPredicted RBP15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 OR10A3P58181 314 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 RPL23AP62750 156 aaKnown RBP15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 RAB11BQ15907 218 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 C2orf76Q3KRA6 126 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 NR2C2APQ86WQ0 139 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 LINC00482Q8N8I6 264 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 OR8H1Q8NGG4 311 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 ARHGAP5-AS1Q96IT6 56 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 PLEKHJ1Q9NW61 149 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 KCNK7Q9Y2U2 307 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 LRRC42Q9Y546 428 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 V9GY05 133 aa15.58■□□□□ 0.08
PDZRN3-202ENST00000308537 TRAV1-2A0A0B4J238 106 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 TMEM272A0A1B0GTI8 110 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 PROP1O75360 226 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 IGLL1P15814 213 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 CNTFRP26992 372 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 MOB1BQ7L9L4 216 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 RNF152Q8N8N0 203 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 FCGR1BQ92637 280 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 URM1Q9BTM9 101 aaKnown RBP15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 PECRQ9BY49 303 aa15.57■□□□□ 0.08
PDZRN3-202ENST00000308537 IGKV1-6A0A0C4DH72 117 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 TRDV1A0A1B0GX56 115 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 AP4M1O00189 453 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 ST8SIA5O15466 376 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 PF4V1P10720 104 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 VEGFCP49767 419 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 MOGAT2Q3SYC2 334 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 HES5Q5TA89 166 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 UBE2UQ5VVX9 321 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 RIMS4Q9H426 269 aaPredicted RBP15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 Q9N2K0 584 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 OR1A1Q9P1Q5 309 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 STEAP1Q9UHE8 339 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 ZNF580Q9UK33 172 aa15.56■□□□□ 0.08
PDZRN3-202ENST00000308537 ITGB1BP1O14713 200 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 RGS11O94810 467 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 SCTP09683 121 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 HLA-DRB3P79483 266 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 FOXB2Q5VYV0 432 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 FOXRED2Q8IWF2 684 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 SPARTQ8N0X7 666 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 OR2AK2Q8NG84 335 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 IL1F10Q8WWZ1 152 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 SLC23A1Q9UHI7 598 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 DNAH9Q9NYC9 4486 aa15.55■□□□□ 0.08
PDZRN3-202ENST00000308537 RAB27BO00194 218 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 RRP9O43818 475 aaKnown RBP15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 IGF1P05019 195 aa15.54■□□□□ 0.08
PDZRN3-202ENST00000308537 CT45A6P0DMU7 189 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms