RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PAXXQ9BUH6 204 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 ZNF665Q9H7R5 613 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 IGSF23A1L1A6 192 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 TUBAL3A6NHL2 446 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 SLC25A1P53007 311 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 TMEM91Q6ZNR0 172 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 MRPL18Q9H0U6 180 aaKnown RBP11.01□□□□□ -0.65
USP38-201ENST00000307017 FOXJ2Q9P0K8 574 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 TYMSP04818 313 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 FCGR3AP08637 254 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 PCP4P48539 62 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 MIC13Q5XKP0 118 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 STPG2Q8N412 459 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 RPS4Y2Q8TD47 263 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 OPN4Q9UHM6 478 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 YBX2Q9Y2T7 364 aaKnown RBP11.01□□□□□ -0.65
USP38-201ENST00000307017 BMI1P35226 326 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 SLC25A30Q5SVS4 291 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 SLC25A42Q86VD7 318 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 OR4B1Q8NGF8 309 aa11.01□□□□□ -0.65
USP38-201ENST00000307017 IGKV1D-16P01601 117 aa11□□□□□ -0.65
USP38-201ENST00000307017 ADRA2AP08913 450 aa11□□□□□ -0.65
USP38-201ENST00000307017 ZNF506Q5JVG8 444 aa11□□□□□ -0.65
USP38-201ENST00000307017 OR4S2Q8NH73 311 aa11□□□□□ -0.65
USP38-201ENST00000307017 KBTBD11O94819 623 aa11□□□□□ -0.65
USP38-201ENST00000307017 SRFP11831 508 aa11□□□□□ -0.65
USP38-201ENST00000307017 KHDC3LQ587J8 217 aa11□□□□□ -0.65
USP38-201ENST00000307017 MBNL2Q5VZF2 373 aaKnown RBP11□□□□□ -0.65
USP38-201ENST00000307017 OR5R1Q8NH85 324 aa11□□□□□ -0.65
USP38-201ENST00000307017 WNT5BQ9H1J7 359 aa11□□□□□ -0.65
USP38-201ENST00000307017 RIPPLY3P57055 190 aa11□□□□□ -0.65
USP38-201ENST00000307017 MMDQ15546 238 aa11□□□□□ -0.65
USP38-201ENST00000307017 DMKNQ6E0U4 476 aaPredicted RBP11□□□□□ -0.65
USP38-201ENST00000307017 ZNF738Q8NE65 137 aa11□□□□□ -0.65
USP38-201ENST00000307017 OIT3Q8WWZ8 545 aa11□□□□□ -0.65
USP38-201ENST00000307017 C16orf92Q96LL3 132 aa11□□□□□ -0.65
USP38-201ENST00000307017 RAXQ9Y2V3 346 aa11□□□□□ -0.65
USP38-201ENST00000307017 ZNF646O15015 1829 aaPredicted RBP11□□□□□ -0.65
USP38-201ENST00000307017 TMEM95Q3KNT9 176 aa11□□□□□ -0.65
USP38-201ENST00000307017 WDFY2Q96P53 400 aa11□□□□□ -0.65
USP38-201ENST00000307017 IMMP2LQ96T52 175 aa11□□□□□ -0.65
USP38-201ENST00000307017 RBKSQ9H477 322 aa11□□□□□ -0.65
USP38-201ENST00000307017 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
USP38-201ENST00000307017 PXMP4Q9Y6I8 212 aa11□□□□□ -0.65
USP38-201ENST00000307017 J3QR06 171 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 GAPDHP04406 335 aaKnown RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 MDH2P40926 338 aaKnown RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 KIR2DL1P43626 348 aaPredicted RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 KIR2DL2P43627 348 aaPredicted RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 SNAI3Q3KNW1 292 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 TOX2Q96NM4 488 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 TMEM160Q9NX00 188 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 ELOA3CA0A087WX78 387 aaPredicted RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 NKX2-2O95096 273 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 VSIG8P0DPA2 414 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 CTGFP29279 349 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 IL24Q13007 206 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 VN1R4Q7Z5H5 301 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 CXorf1O96002 111 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 CTSBP07858 339 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 FCGR2BP31994 310 aaPredicted RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 CTAG1AP78358 180 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 LINC01465Q8N7H1 131 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 OR13C6PQ8NH95 151 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 OR8B2Q96RD0 313 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 SIRT7Q9NRC8 400 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 NRAPQ86VF7 1730 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 IL9P15248 144 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 IRF3Q14653 427 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 ERVH48-1M5A8F1 160 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 CKS2P33552 79 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 SURF2Q15527 256 aaPredicted RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 ZNF98A6NK75 572 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 C2orf83Q53S99 150 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 TMEM108Q6UXF1 575 aa10.99□□□□□ -0.65
USP38-201ENST00000307017 LINC00615Q96LM1 132 aaPredicted RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 LSM4Q9Y4Z0 139 aaKnown RBP10.99□□□□□ -0.65
USP38-201ENST00000307017 TMEM189A5PLL7 270 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 SSBP1Q04837 148 aaKnown RBP10.98□□□□□ -0.65
USP38-201ENST00000307017 OR1L1Q8NH94 360 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 HMSDA8MTL9 139 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 LMO7DNF2Z398 122 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 GGTLC2Q14390 218 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 TP53BP1Q12888 1972 aaPredicted RBP10.98□□□□□ -0.65
USP38-201ENST00000307017 IGHV1OR21-1A0A087WYE8 117 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 FGF9P31371 208 aaPredicted RBP10.98□□□□□ -0.65
USP38-201ENST00000307017 UBALD2Q8IYN6 164 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 PUSL1Q8N0Z8 303 aaKnown RBP10.98□□□□□ -0.65
USP38-201ENST00000307017 AMELYQ99218 206 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 OR2H1Q9GZK4 316 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 TMEM262E9PQX1 116 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 CTSDP07339 412 aaPredicted RBP10.98□□□□□ -0.65
USP38-201ENST00000307017 FKBP2P26885 142 aaKnown RBP10.98□□□□□ -0.65
USP38-201ENST00000307017 LHX2P50458 406 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms