RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 GAPDHP04406 335 aaKnown RBP8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SCTP09683 121 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TMEM69Q5SWH9 247 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FAM53AQ6NSI3 398 aaPredicted RBP8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 C12orf54Q6X4T0 127 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 Q6ZPA2 131 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 IZUMO1Q8IYV9 350 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 NUDCD2Q8WVJ2 157 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 MAFIPQ8WZ33 124 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ISOC1Q96CN7 298 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CMTM3Q96MX0 182 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 GINS4Q9BRT9 223 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZNF230Q9UIE0 474 aaPredicted RBP8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TMEM89A2RUT3 159 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 LY6LH3BQJ8 138 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 BET1O15155 118 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CEACAM6P40199 344 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CBX5P45973 191 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 REG1BP48304 166 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RAB13P51153 203 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RAG2P55895 527 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZNF816Q0VGE8 651 aaPredicted RBP8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 HES1Q14469 280 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SRSF7Q16629 238 aaKnown RBP eCLIP8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CT45A1Q5HYN5 189 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 LY6G6FQ5SQ64 297 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 C5orf24Q7Z6I8 188 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TGIF2LXQ8IUE1 241 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZNF439Q8NDP4 499 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR4F5Q8NH21 305 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR10J5Q8NHC4 309 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CT45A3Q8NHU0 189 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 AKR1E2Q96JD6 320 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CABLES2Q9BTV7 478 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ST6GALNAC5Q9BVH7 336 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 IFT46Q9NQC8 304 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CCDC59Q9P031 241 aaKnown RBP8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 PIPOXQ9P0Z9 390 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR1A1Q9P1Q5 309 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ADAM30Q9UKF2 790 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ELF5Q9UKW6 265 aaPredicted RBP8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 NF1P21359 2839 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 MXRA5Q9NR99 2828 aa8.86□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 IGHV1-3A0A0C4DH29 117 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 A0A1W2PPI3 338 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 H3BMQ9 156 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TIMM23O14925 209 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ST8SIA5O15466 376 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RGS5O15539 181 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 HPGDSO60760 199 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 DIRAS3O95661 229 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 APOA1P02647 267 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 EIF4EP06730 217 aaKnown RBP8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 GSTT2P0CG29 244 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 GSTT2BP0CG30 244 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FAM106CPP0CH98 169 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZNF137PP52743 207 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TAS2R20P59543 309 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ARPC4P59998 168 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SPCS2Q15005 226 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ARSJQ5FYB0 599 aaPredicted RBP8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 Q6ZS49 121 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 C16orf82Q7Z2V1 217 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 MOB3BQ86TA1 216 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TMEM219Q86XT9 240 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 DTX3Q8N9I9 347 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR4C13Q8NGP0 309 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR56B4Q8NH76 319 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RTN4IP1Q8WWV3 396 aaPredicted RBP8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 S1PR3Q99500 378 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 NPFFR1Q9GZQ6 430 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 AUNIPQ9H7T9 357 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 C1RLQ9NZP8 487 aa8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RBM7Q9Y580 266 aaKnown RBP8.85□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SAA2-SAA4A0A096LPE2 208 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 A0A1B0GUS0 222 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 A6NDX4 124 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ITGB1BP1O14713 200 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RAB29O14966 203 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 LANCL1O43813 399 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 NDUFA7O95182 113 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SNRNP70P08621 437 aaKnown RBP8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CTXN2P0C2S0 81 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SAA2P0DJI9 122 aaPredicted RBP8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TMEM11P17152 192 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CD24P25063 80 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 GPR12P47775 334 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZNF134P52741 427 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 DIAPH2-AS1Q14236 149 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 IGSF11Q5DX21 431 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FAM71F2Q6NXP2 309 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 DRAM1Q8N682 238 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 PIFOQ8TCI5 191 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SLC25A33Q9BSK2 321 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 GHITMQ9H3K2 345 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RANBP3Q9H6Z4 567 aaPredicted RBP8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 BEX1Q9HBH7 125 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RDH8Q9NYR8 311 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZNF221Q9UK13 617 aa8.84□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TRBV6-7A0A0A0MS04 114 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms