RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 NKX2-1P43699 371 aaPredicted RBP13.76□□□□□ -0.21
LONRF3-201ENST00000304778 ERVFC1-1P60608 527 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 HERPUD1Q15011 391 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 NCR3LG1Q68D85 454 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 EXTL1Q92935 676 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 TMEM56Q96MV1 263 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 CABLES2Q9BTV7 478 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 CDH20Q9HBT6 801 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 TMEM56-RWDD3S4R434 201 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 DMXL1Q9Y485 3027 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 URB1O60287 2271 aaKnown RBP13.76□□□□□ -0.21
LONRF3-201ENST00000304778 XKRY2A2RUG3 117 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 PITX3O75364 302 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 METTL15P1P0C7V9 234 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 ARG2P78540 354 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 TBC1D26Q86UD7 250 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 TMEM217Q8N7C4 229 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 SPIN2AQ99865 258 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 SPIN2BQ9BPZ2 258 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 ZNHIT1O43257 154 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 RPL29P47914 159 aaKnown RBP13.75□□□□□ -0.21
LONRF3-201ENST00000304778 RND2P52198 227 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 RPL23AP62750 156 aaKnown RBP13.75□□□□□ -0.21
LONRF3-201ENST00000304778 MRPS11P82912 194 aaKnown RBP13.75□□□□□ -0.21
LONRF3-201ENST00000304778 DMRTA1Q5VZB9 504 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 TMPRSS7Q7RTY8 843 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 HIST1H2AAQ96QV6 131 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 IGSF23A1L1A6 192 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF506Q5JVG8 444 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 BTNL3Q6UXE8 466 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF695Q8IW36 515 aa13.75□□□□□ -0.21
LONRF3-201ENST00000304778 UBE2J1Q9Y385 318 aaPredicted RBP13.75□□□□□ -0.21
LONRF3-201ENST00000304778 B4DEV8 164 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 NKX2-8O15522 239 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 CST7O76096 145 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 EPHA1P21709 976 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 P2RY6Q15077 328 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 SRSF7Q16629 238 aaKnown RBP eCLIP13.74□□□□□ -0.21
LONRF3-201ENST00000304778 NRN1LQ496H8 165 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF766Q5HY98 468 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 RNFT1Q5M7Z0 435 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 COLCA1Q6ZS62 124 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 OR10A7Q8NGE5 316 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 TMEM171Q8WVE6 324 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 TRBV24-1A0A075B6N3 115 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 RPLP1P05386 114 aaKnown RBP13.74□□□□□ -0.21
LONRF3-201ENST00000304778 BCL3P20749 454 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 GAGE1Q13065 139 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 SPIN3Q5JUX0 258 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 ABHD14BQ96IU4 210 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF552Q9H707 407 aaPredicted RBP13.74□□□□□ -0.21
LONRF3-201ENST00000304778 Q9N2K0 584 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 LYRM2Q9NU23 88 aaPredicted RBP13.74□□□□□ -0.21
LONRF3-201ENST00000304778 GAB2Q9UQC2 676 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 NAPSAO96009 420 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 LINC00614P0C842 121 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 CD82P27701 267 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 OR3A1P47881 315 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 RAB11AP62491 216 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF818PQ6ZRF7 136 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 SELENOHQ8IZQ5 122 aaKnown RBP13.74□□□□□ -0.21
LONRF3-201ENST00000304778 OR56B2PQ8NGI1 322 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 PLEKHF2Q9H8W4 249 aa13.74□□□□□ -0.21
LONRF3-201ENST00000304778 NBEAQ8NFP9 2946 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 CEP250Q9BV73 2442 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 FAM186AA6NE01 2351 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 A0A1B0GU03 582 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 SSSCA1O60232 199 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 HLA-HP01893 362 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 CRYABP02511 175 aaKnown RBP13.73□□□□□ -0.21
LONRF3-201ENST00000304778 MMP9P14780 707 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 PMS2P11Q13670 270 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 ARSJQ5FYB0 599 aaPredicted RBP13.73□□□□□ -0.21
LONRF3-201ENST00000304778 KIAA2026Q5HYC2 2103 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 NUFIP2Q7Z417 695 aaKnown RBP13.73□□□□□ -0.21
LONRF3-201ENST00000304778 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
LONRF3-201ENST00000304778 OR8G5Q8NG78 346 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 CLDND2Q8NHS1 167 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 APH1AQ96BI3 265 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 IFNL4K9M1U5 179 aa13.73□□□□□ -0.21
LONRF3-201ENST00000304778 CYB5R3P00387 301 aaPredicted RBP13.73□□□□□ -0.21
LONRF3-201ENST00000304778 RPP30P78346 268 aaKnown RBP13.73□□□□□ -0.21
LONRF3-201ENST00000304778 DUXBA0A1W2PPF3 345 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF503-AS2A6NEH8 195 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 ADAM20O43506 726 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 FGF12P61328 243 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 IQCJQ1A5X6 159 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 WDR25Q64LD2 544 aaPredicted RBP13.72□□□□□ -0.21
LONRF3-201ENST00000304778 MCEMP1Q8IX19 187 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 SAXO1Q8IYX7 474 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 GAPTQ8N292 157 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 TMEM252Q8N6L7 170 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 FGF23Q9GZV9 251 aaPredicted RBP13.72□□□□□ -0.21
LONRF3-201ENST00000304778 ASCL3Q9NQ33 180 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 GVINP1Q7Z2Y8 2422 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 CHD3Q12873 2000 aaKnown RBP13.72□□□□□ -0.21
LONRF3-201ENST00000304778 CLEC18AA5D8T8 446 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 SCTP09683 121 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 CCL2P13500 99 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 CCNOP22674 350 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms