RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 JUNBP17275 347 aaPredicted RBP6.72□□□□□ -1.33
SCN9A-201ENST00000303354 RCC1P18754 421 aaPredicted RBP6.72□□□□□ -1.33
SCN9A-201ENST00000303354 OR10J1P30954 320 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 TMEM33P57088 247 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 LSM6P62312 80 aaKnown RBP6.72□□□□□ -1.33
SCN9A-201ENST00000303354 CXorf66Q5JRM2 361 aaPredicted RBP6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ZNF519Q8TB69 540 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ATP5SQ99766 215 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ZMAT5Q9UDW3 170 aaKnown RBP6.72□□□□□ -1.33
SCN9A-201ENST00000303354 STRCQ7RTU9 1775 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 GP1BAP07359 652 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 PGA4P0DJD7 388 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 PGA3P0DJD8 388 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 MPV17P39210 176 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 SULT1A2P50226 295 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 CLEC19AQ6UXS0 136 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 SCGB1D4Q6XE38 83 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 OR1L8Q8NGR8 309 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 ZNF502Q8TBZ5 544 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 MOSP00540 346 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 PCMT1P22061 227 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 PCSK4Q6UW60 755 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 TEX261Q6UWH6 196 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 Q6ZN92 141 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 TMED3Q9Y3Q3 217 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 COL22A1Q8NFW1 1626 aaPredicted RBP6.71□□□□□ -1.33
SCN9A-201ENST00000303354 TMEM210A6NLX4 147 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 APOBEC3AP31941 199 aaPredicted RBP6.71□□□□□ -1.33
SCN9A-201ENST00000303354 FXYD3Q14802 87 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 TMEM241Q24JQ0 296 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 FAM122BQ7Z309 247 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 LFNGQ8NES3 379 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 VSTM2AQ8TAG5 236 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 HMGCLL1Q8TB92 370 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 ABHD1Q96SE0 405 aa6.71□□□□□ -1.33
SCN9A-201ENST00000303354 C19orf54Q5BKX5 351 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 FBXL15Q9H469 300 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 PITPNC1Q9UKF7 332 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 SHISA5Q8N114 240 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 DNASE2BQ8WZ79 361 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 SNRNP40Q96DI7 357 aaKnown RBP6.71□□□□□ -1.34
SCN9A-201ENST00000303354 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 LEUTXA8MZ59 168 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 COLCA1Q6ZS62 124 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 FOXC2Q99958 501 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 NGFRP08138 427 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 NANOS3P60323 173 aaKnown RBP6.71□□□□□ -1.34
SCN9A-201ENST00000303354 BTG1P62324 171 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 RPL39P5Q59GN2 51 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 PRSS27Q9BQR3 290 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 RUNX1Q01196 453 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 HERPUD1Q15011 391 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 CCDC144NLQ6NUI1 221 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 DHRS11Q6UWP2 260 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 C9orf106Q8NAJ2 232 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 WNT2BQ93097 391 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 WDR34Q96EX3 536 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 PACRGQ96M98 296 aaPredicted RBP6.71□□□□□ -1.34
SCN9A-201ENST00000303354 DOCK5Q9H7D0 1870 aa6.71□□□□□ -1.34
SCN9A-201ENST00000303354 KLF9Q13886 244 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-201ENST00000303354 OR52M1Q8NGK5 317 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 AKIP1Q9NQ31 210 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 PGPA6NDG6 321 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 OR2A4O95047 310 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 VSIG8P0DPA2 414 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 KIR3DL2P43630 455 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 B2MP61769 119 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 OR2A7Q96R45 310 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 PAXXQ9BUH6 204 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 IGF2P01344 180 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 MMP9P14780 707 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 NEU3Q9UQ49 428 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 TGFBR3LH3BV60 316 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 RGS13O14921 159 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 C1QBP02746 253 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 AREGP15514 252 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 FXYD7P58549 80 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 TOMM20LQ6UXN7 152 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 C1QL2Q7Z5L3 287 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 RAB40CQ96S21 281 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 NEURL2Q9BR09 285 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 MIOXQ9UGB7 285 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 OR2W1Q9Y3N9 320 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 HIST1H1AQ02539 215 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-201ENST00000303354 IL17RELQ6ZVW7 336 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 FAM216BQ8N7L0 139 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 A0A0B4J293 547 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 C11orf94C9JXX5 98 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 OTX1P32242 354 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-201ENST00000303354 PMS2P11Q13670 270 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 NRN1LQ496H8 165 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 FOXB2Q5VYV0 432 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 C1orf162Q8NEQ5 155 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-201ENST00000303354 PGLYRP4Q96LB8 373 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 TBX15Q96SF7 602 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 GPX7Q96SL4 187 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-201ENST00000303354 C11orf68Q9H3H3 251 aaKnown RBP6.7□□□□□ -1.34
SCN9A-201ENST00000303354 ARRDC5A6NEK1 342 aa6.7□□□□□ -1.34
SCN9A-201ENST00000303354 RBM11P57052 281 aaKnown RBP6.7□□□□□ -1.34
SCN9A-201ENST00000303354 ZNF56Q15929 161 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms