RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 ZNF343Q6P1L6 599 aa11.14□□□□□ -0.63
CLPX-201ENST00000300107 SMRP1Q8NCR6 262 aa11.14□□□□□ -0.63
CLPX-201ENST00000300107 GGACTQ9BVM4 153 aa11.14□□□□□ -0.63
CLPX-201ENST00000300107 TREM2Q9NZC2 230 aa11.14□□□□□ -0.63
CLPX-201ENST00000300107 HSPB8Q9UJY1 196 aa11.14□□□□□ -0.63
CLPX-201ENST00000300107 SDK2Q58EX2 2172 aa11.14□□□□□ -0.63
CLPX-201ENST00000300107 PLPPR5Q32ZL2 321 aa11.14□□□□□ -0.63
CLPX-201ENST00000300107 WDR74Q6RFH5 385 aaPredicted RBP11.14□□□□□ -0.63
CLPX-201ENST00000300107 RARRES2Q99969 163 aa11.14□□□□□ -0.63
CLPX-201ENST00000300107 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.14□□□□□ -0.63
CLPX-201ENST00000300107 LOC102724200A0A096LPH7 203 aaPredicted RBP11.13□□□□□ -0.63
CLPX-201ENST00000300107 A0A0G2JK05 382 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 NCBP2LA6PVI3 153 aaKnown RBP11.13□□□□□ -0.63
CLPX-201ENST00000300107 ZNF207O43670 478 aaKnown RBP11.13□□□□□ -0.63
CLPX-201ENST00000300107 MELTFP08582 738 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 PRF1P14222 555 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 THYN1Q9P016 225 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 DOCK5Q9H7D0 1870 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 TRGC1P0CF51 173 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 IL11P20809 199 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 OR4B1Q8NGF8 309 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 TAF15Q92804 592 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLPX-201ENST00000300107 NPVFQ9HCQ7 196 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 OR2T8A6NH00 312 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 WDR25Q64LD2 544 aaPredicted RBP11.13□□□□□ -0.63
CLPX-201ENST00000300107 TMEM116Q8NCL8 245 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 OR4X1Q8NH49 305 aa11.13□□□□□ -0.63
CLPX-201ENST00000300107 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
CLPX-201ENST00000300107 C5orf67F2Z3F1 127 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 KLF4O43474 513 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 TSPAN2O60636 221 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 MPDU1O75352 247 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 LIFP15018 202 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 FHITP49789 147 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 TRIP6Q15654 476 aaKnown RBP11.12□□□□□ -0.63
CLPX-201ENST00000300107 SPINK14Q6IE38 97 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 ATRAIDQ6UW56 229 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 POC1AQ8NBT0 407 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 NUDT16L1Q9BRJ7 211 aaKnown RBP11.12□□□□□ -0.63
CLPX-201ENST00000300107 PIPOXQ9P0Z9 390 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 SIAH2O43255 324 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 SYNGR1O43759 233 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 GREM1O60565 184 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 ZNF708P17019 499 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 FGF12P61328 243 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 HES3Q5TGS1 186 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 GFRALQ6UXV0 394 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 DDA1Q9BW61 102 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 SCTP09683 121 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 GNB2P62879 340 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 CCL17Q92583 94 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 ADIPOR1Q96A54 375 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 OR4C12Q96R67 309 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 TMEM14DPA8MWL7 114 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 C4orf51C9J302 202 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 GLIPR1P48060 266 aa11.12□□□□□ -0.63
CLPX-201ENST00000300107 RPS11P62280 158 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLPX-201ENST00000300107 TNXAQ16473 311 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 C10orf113Q5VZT2 155 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 REC114Q7Z4M0 266 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 SLC35B1P78383 322 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 OR52M1Q8NGK5 317 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 ZNF488Q96MN9 340 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 SH3BGRL3Q9H299 93 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 ZNF71Q9NQZ8 489 aaPredicted RBP11.11□□□□□ -0.63
CLPX-201ENST00000300107 FAM206AQ9NX38 181 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 A0A0J9YW62 118 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 PRRX1P54821 245 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 AESQ08117 197 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 CTHRC1Q96CG8 243 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 KCNMB2Q9Y691 235 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 PXMP4Q9Y6I8 212 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 IGKV1D-42A0A075B6H8 117 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 J3QR06 171 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 K7ESF4 209 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 CRYABP02511 175 aaKnown RBP11.11□□□□□ -0.63
CLPX-201ENST00000300107 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
CLPX-201ENST00000300107 PSG4Q00888 419 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 SLC25A47Q6Q0C1 308 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 FLYWCH2Q96CP2 140 aaKnown RBP11.11□□□□□ -0.63
CLPX-201ENST00000300107 PERPQ96FX8 193 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 NPTNQ9Y639 398 aa11.11□□□□□ -0.63
CLPX-201ENST00000300107 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 EIF4E3Q8N5X7 224 aaKnown RBP11.1□□□□□ -0.63
CLPX-201ENST00000300107 G6PC2Q9NQR9 355 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 CACNA1HO95180 2353 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 MSGN1A6NI15 193 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 M0R296 226 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 HBZP02008 142 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 AGAP20933 346 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 PMCHL1Q16048 86 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 CEACAM21Q3KPI0 293 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 GPR146Q96CH1 333 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 GLRX2Q9NS18 164 aa11.1□□□□□ -0.63
CLPX-201ENST00000300107 CISD1Q9NZ45 108 aaKnown RBP11.1□□□□□ -0.63
CLPX-201ENST00000300107 LHFPL6Q9Y693 200 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms