RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ANGPTL4Q9BY76 406 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 RAB29O14966 203 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 KCNMB1Q16558 191 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNF343Q6P1L6 599 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 C16orf92Q96LL3 132 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNF324O75467 553 aaPredicted RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CXCL2P19875 107 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PLAURQ03405 335 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CYB561D1Q8N8Q1 229 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SMRP1Q8NCR6 262 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ITLN1Q8WWA0 313 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNF764Q96H86 408 aaPredicted RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 C1RLQ9NZP8 487 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 KCNK7Q9Y2U2 307 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PXMP4Q9Y6I8 212 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CACNA1CQ13936 2221 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IGKV1-8A0A0C4DH67 115 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TMEM210A6NLX4 147 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 OR2H2O95918 312 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 UCP2P55851 309 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 VKORC1L1Q8N0U8 176 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 HSPB8Q9UJY1 196 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 A0A1B0GU03 582 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 DHRS7CA6NNS2 312 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CEACAM18A8MTB9 384 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PITX3O75364 302 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 C1QL1O75973 258 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 GPR6P46095 362 aaPredicted RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 FAM3BP58499 235 aaPredicted RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 FXYD3Q14802 87 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 INO80CQ6PI98 192 aaPredicted RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 RBKSQ9H477 322 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MOSPD3O75425 235 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PF4V1P10720 104 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNF738Q8NE65 137 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 K7N7A8 449 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 OR10J1P30954 320 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 C8orf82Q6P1X6 216 aaPredicted RBP11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PGLYRP4Q96LB8 373 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 WFIKKN1Q96NZ8 548 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SMCHD1A6NHR9 2005 aa11.76□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SURF2Q15527 256 aaPredicted RBP11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 HOGA1Q86XE5 327 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 BPIFA4PQ86YQ2 179 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 UBE2L6O14933 153 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 NDUFB4O95168 129 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IGHV3-23P01764 117 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ISLRO14498 428 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 OR2A4O95047 310 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ID1P41134 155 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TMEM171Q8WVE6 324 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 OR2A7Q96R45 310 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 DUSP15Q9H1R2 295 aaPredicted RBP11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MIA3Q5JRA6 1907 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TMEM189A5PLL7 270 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TGIF1Q15583 401 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 WDR25Q64LD2 544 aaPredicted RBP11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CARFQ8N187 725 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 C10orf35Q96D05 121 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MCM3APO60318 1980 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 C17orf51A8MQB3 221 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 DIRC3C9JPN6 131 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TCF21O43680 179 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CD74P04233 296 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 RPLP1P05386 114 aaKnown RBP11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PAFAH1B2P68402 229 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PMS2CLQ68D20 193 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MRGPRGQ86SM5 289 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MS4A5Q9H3V2 200 aa11.75□□□□□ -0.53
CHRFAM7A-201ENST00000299847 HSPB1P04792 205 aaKnown RBP11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IRF3Q14653 427 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 KIAA1217Q5T5P2 1943 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MUC1P15941 1255 aaPredicted RBP11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 C19orf48Q6RUI8 117 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 RARRES2Q99969 163 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PTP4A3O75365 173 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 DEDDO75618 318 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 GZMMP51124 257 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 RELBQ01201 579 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNF501Q96CX3 271 aaPredicted RBP11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PRSS27Q9BQR3 290 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 MIOXQ9UGB7 285 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IGKV3-20P01619 116 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNF735P0CB33 412 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZFP36L2P47974 494 aaKnown RBP11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TM4SF20Q53R12 229 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CTXND1A0A1B0GTU2 59 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 KIR2DL2P43627 348 aaPredicted RBP11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 TLNRD1Q9H1K6 362 aa11.74□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ISXQ2M1V0 245 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 WDFY1Q8IWB7 410 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 NEU1Q99519 415 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SIRT7Q9NRC8 400 aa11.73□□□□□ -0.53
CHRFAM7A-201ENST00000299847 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms