RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 DYSFO75923 2080 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 CRYM-AS1A6NIL9 109 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 HEXAP06865 529 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 NDUFB7P17568 137 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 LOXP28300 417 aaPredicted RBP13.01□□□□□ -0.33
LSM6-201ENST00000296581 SRSF4Q08170 494 aaKnown RBP13.01□□□□□ -0.33
LSM6-201ENST00000296581 C11orf88Q6PI97 169 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 ZNF808Q8N4W9 903 aaPredicted RBP13.01□□□□□ -0.33
LSM6-201ENST00000296581 BOLLQ8N9W6 283 aaKnown RBP13.01□□□□□ -0.33
LSM6-201ENST00000296581 OR11L1Q8NGX0 322 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 PLAUP00749 431 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 PPP1R3CQ9UQK1 317 aa13.01□□□□□ -0.33
LSM6-201ENST00000296581 ANKHD1Q8IWZ3 2542 aaKnown RBP13.01□□□□□ -0.33
LSM6-201ENST00000296581 DEFB108AA8MXU0 73 aa13□□□□□ -0.33
LSM6-201ENST00000296581 AGAP20933 346 aa13□□□□□ -0.33
LSM6-201ENST00000296581 SLC9A3R2Q15599 337 aa13□□□□□ -0.33
LSM6-201ENST00000296581 MST1LQ2TV78 715 aa13□□□□□ -0.33
LSM6-201ENST00000296581 LIN54Q6MZP7 749 aa13□□□□□ -0.33
LSM6-201ENST00000296581 H1FOOQ8IZA3 346 aaPredicted RBP13□□□□□ -0.33
LSM6-201ENST00000296581 C14orf144Q96I85 54 aa13□□□□□ -0.33
LSM6-201ENST00000296581 KIRREL1Q96J84 757 aa13□□□□□ -0.33
LSM6-201ENST00000296581 METTL1Q9UBP6 276 aaKnown RBP13□□□□□ -0.33
LSM6-201ENST00000296581 ROS1P08922 2347 aa13□□□□□ -0.33
LSM6-201ENST00000296581 IGHV3OR15-7A0A075B7D8 119 aa13□□□□□ -0.33
LSM6-201ENST00000296581 B9A039 149 aa13□□□□□ -0.33
LSM6-201ENST00000296581 CD80P33681 288 aa13□□□□□ -0.33
LSM6-201ENST00000296581 PIGPP57054 158 aa13□□□□□ -0.33
LSM6-201ENST00000296581 CCL8P80075 99 aa13□□□□□ -0.33
LSM6-201ENST00000296581 AESQ08117 197 aa13□□□□□ -0.33
LSM6-201ENST00000296581 FABP9Q0Z7S8 132 aa13□□□□□ -0.33
LSM6-201ENST00000296581 ANKRD55Q3KP44 614 aa13□□□□□ -0.33
LSM6-201ENST00000296581 SGPP2Q8IWX5 399 aa13□□□□□ -0.33
LSM6-201ENST00000296581 SNX22Q96L94 193 aa13□□□□□ -0.33
LSM6-201ENST00000296581 EGLN1Q9GZT9 426 aa13□□□□□ -0.33
LSM6-201ENST00000296581 FXYD6-FXYD2A0A087WZ82 144 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 CLDN14O95500 239 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 CYB5R3P00387 301 aaPredicted RBP12.99□□□□□ -0.33
LSM6-201ENST00000296581 ABCA11PQ4W5N1 156 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 KCTD9Q7L273 389 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 OR10J5Q8NHC4 309 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 ITLN2Q8WWU7 325 aaPredicted RBP12.99□□□□□ -0.33
LSM6-201ENST00000296581 TAF9BQ9HBM6 251 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 SLC2A9Q9NRM0 540 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 CISD1Q9NZ45 108 aaKnown RBP12.99□□□□□ -0.33
LSM6-201ENST00000296581 DSCAMO60469 2012 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 IFNA2P01563 188 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 NPBWR1P48145 328 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 KRBOX4Q5JUW0 171 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 FAM201AQ5SY85 155 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 TEX36Q5VZQ5 186 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 STUMQ69YW2 141 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 ZCCHC24Q8N2G6 241 aaKnown RBP12.99□□□□□ -0.33
LSM6-201ENST00000296581 PPP1R35Q8TAP8 253 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 RTN4IP1Q8WWV3 396 aaPredicted RBP12.99□□□□□ -0.33
LSM6-201ENST00000296581 GALNT14Q96FL9 552 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 MS4A5Q9H3V2 200 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 NAA60Q9H7X0 242 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 KCNIP1Q9NZI2 227 aa12.99□□□□□ -0.33
LSM6-201ENST00000296581 ADGRG4Q8IZF6 3080 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 IGKV1D-13A0A0B4J2D9 117 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 OOEPA6NGQ2 149 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 C1orf196B1AJZ1 125 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 ZG16O60844 167 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 IGKV1-13P0DP09 117 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 IRF2P14316 349 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 GNRHRP30968 328 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 GABRA2P47869 451 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
LSM6-201ENST00000296581 SDSLQ96GA7 329 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 SAP30LQ9HAJ7 183 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 RAB18Q9NP72 206 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 DYNLRB1Q9NP97 96 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
LSM6-201ENST00000296581 OR2W1Q9Y3N9 320 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
LSM6-201ENST00000296581 TEX13DA0A0J9YY54 714 aaPredicted RBP12.97□□□□□ -0.33
LSM6-201ENST00000296581 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 K7N7A8 449 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 CCSO14618 274 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 MGST3O14880 152 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 CD8AP01732 235 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 GLIPR1P48060 266 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 RND3P61587 244 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 UBA52P62987 128 aaKnown RBP12.97□□□□□ -0.33
LSM6-201ENST00000296581 C10orf91Q5T1B1 145 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 TGIF2LYQ8IUE0 185 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 FAM185AQ8N0U4 392 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 CCDC71LQ8N9Z2 235 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 OR1A1Q9P1Q5 309 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 KIAA2026Q5HYC2 2103 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 TANC2Q9HCD6 1990 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 LRRC30A6NM36 301 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 COLCA2A8K830 154 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 PHLDA2Q53GA4 152 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 ZNF561Q8N587 486 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 IL1F10Q8WWZ1 152 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 RHOVQ96L33 236 aa12.97□□□□□ -0.33
LSM6-201ENST00000296581 LURAP1Q96LR2 239 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms