RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 BAZ2AQ9UIF9 1905 aaKnown RBP10.21□□□□□ -0.77
SNIP1-201ENST00000296215 ARHGEF28Q8N1W1 1705 aaKnown RBP10.21□□□□□ -0.77
SNIP1-201ENST00000296215 TRGV10A0A0A0MS01 117 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 C17orf102A2RUQ5 167 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 RGRP47804 291 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 NANOS3P60323 173 aaKnown RBP10.21□□□□□ -0.78
SNIP1-201ENST00000296215 CATR1Q13166 79 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 C5orf64Q2M2E5 130 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 ZNF260Q3ZCT1 412 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 ACSM6Q6P461 480 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 TMEM64Q6YI46 380 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 OR4C13Q8NGP0 309 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 R4GMQ9 66 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 AKAP12Q02952 1782 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 TMSB15BA0A087X1C1 80 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 H3BRM9 83 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 TUSC2O75896 110 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 EFEMP2O95967 443 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 GDF1P27539 372 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 SPSB4Q96A44 273 aa10.21□□□□□ -0.78
SNIP1-201ENST00000296215 KIF1AQ12756 1690 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 EDN1P05305 212 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 EGR1P18146 543 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 VDAC1P21796 283 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 MORN2Q502X0 79 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 DACT2Q5SW24 774 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 UNQ9370/PRO34162Q6UXP9 181 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 OVCA2Q8WZ82 227 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 GNB4Q9HAV0 340 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 IL36BQ9NZH7 164 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 NTN1O95631 604 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 CD55P08174 381 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 IFITM1P13164 125 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 RPS4XP62701 263 aaKnown RBP10.2□□□□□ -0.78
SNIP1-201ENST00000296215 RASL11AQ6T310 242 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 DEFB125Q8N687 156 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 RNF183Q96D59 192 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 MS4A6AQ9H2W1 248 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 USP54Q70EL1 1684 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 NPIPB5A8MRT5 1133 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 TPRX1Q8N7U7 411 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.2□□□□□ -0.78
SNIP1-201ENST00000296215 TMEM147Q9BVK8 224 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 STRADBQ9C0K7 418 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 PELI2Q9HAT8 420 aa10.2□□□□□ -0.78
SNIP1-201ENST00000296215 TRAV9-1A0A075B6T8 112 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 CXorf1O96002 111 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 ASAH2BP0C7U1 165 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 OR10J3Q5JRS4 329 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 BOKQ9UMX3 212 aaPredicted RBP10.19□□□□□ -0.78
SNIP1-201ENST00000296215 PPLO60437 1756 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 SOCS1O15524 211 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 LDB3O75112 727 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 RPS16P62249 146 aaKnown RBP10.19□□□□□ -0.78
SNIP1-201ENST00000296215 BVES-AS1Q5T3Y7 98 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 BATF2Q8N1L9 274 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 CA13Q8N1Q1 262 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 TIMD4Q96H15 378 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 RTN4RQ9BZR6 473 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 SYNGR2O43760 224 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
SNIP1-201ENST00000296215 C1orf140Q5VVS0 124 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 RFLNBQ8N5W9 214 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 SLC35A4Q96G79 324 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 LINC00615Q96LM1 132 aaPredicted RBP10.19□□□□□ -0.78
SNIP1-201ENST00000296215 OR2W1Q9Y3N9 320 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 KCNE3Q9Y6H6 103 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 TIAM2Q8IVF5 1701 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
SNIP1-201ENST00000296215 TRBV20-1A0A075B6N2 111 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 hDV102S1A0JD36 115 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 RER1O15258 196 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 OR3A4PP47883 348 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 NOVP48745 357 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 OR8B8Q15620 311 aa10.19□□□□□ -0.78
SNIP1-201ENST00000296215 LSM10Q969L4 123 aaKnown RBP10.19□□□□□ -0.78
SNIP1-201ENST00000296215 LILRA1O75019 489 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 ACTL6BO94805 426 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 ATP5J2P56134 94 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 TRAV8-1A0A0A6YYK1 113 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 KIR2DS1A0A191URI9 304 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 OR9G9P0C7N8 305 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 CSRP3P50461 194 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 RPS11P62280 158 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNIP1-201ENST00000296215 KIR2DS1Q14954 304 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 LYSMD4Q5XG99 296 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.18□□□□□ -0.78
SNIP1-201ENST00000296215 OR1F12Q8NHA8 337 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 OTOSQ8NHW6 89 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 MMABQ96EY8 250 aaPredicted RBP10.18□□□□□ -0.78
SNIP1-201ENST00000296215 RBM24Q9BX46 236 aaKnown RBP10.18□□□□□ -0.78
SNIP1-201ENST00000296215 C1QTNF4Q9BXJ3 329 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 CRIM1Q9NZV1 1036 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 KLHDC2Q9Y2U9 406 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 TRAV38-1A0A0B4J264 116 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 IGLC1P0CG04 106 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 ZNF415Q09FC8 603 aa10.18□□□□□ -0.78
SNIP1-201ENST00000296215 ZNF611Q8N823 705 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms