RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TMEM65Q6PI78 240 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 ODF3L1Q8IXM7 274 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 CBR4Q8N4T8 237 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 OR8H1Q8NGG4 311 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 OR52L2PQ8NGH6 319 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 GPR148Q8TDV2 347 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 TMEM106AQ96A25 262 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 MRPL48Q96GC5 212 aaKnown RBP7.17□□□□□ -1.26
CNOT9-202ENST00000295701 SLC29A1Q99808 456 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 MRPL20Q9BYC9 149 aaKnown RBP7.17□□□□□ -1.26
CNOT9-202ENST00000295701 OR51J1Q9H342 316 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 BANF2Q9H503 90 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 TMEM138Q9NPI0 162 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 PARP11Q9NR21 331 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 ETAA1Q9NY74 926 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 GNG12Q9UBI6 72 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 FBXO7Q9Y3I1 522 aa7.17□□□□□ -1.26
CNOT9-202ENST00000295701 ALMS1Q8TCU4 4167 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 TRAV8-7A0A075B6U6 113 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 IGHV4OR15-8A0A075B7B6 117 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 A0A087WW49 117 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 TRAV41A0A0B4J266 112 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 A0A1W2PPK0 400 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 UBE2QL1A1L167 161 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 FAM90A10PA6NDY2 464 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 SNTNA6NMZ2 147 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 H3BNX3 289 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 SPINT2O43291 252 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 LANCL1O43813 399 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 FADS2O95864 444 aaKnown RBP7.16□□□□□ -1.26
CNOT9-202ENST00000295701 LALBAP00709 142 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 GP9P14770 177 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 IGFBP3P17936 291 aaPredicted RBP7.16□□□□□ -1.26
CNOT9-202ENST00000295701 PPP1CCP36873 323 aaKnown RBP7.16□□□□□ -1.26
CNOT9-202ENST00000295701 OR3A3P47888 321 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 INSL3P51460 131 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 ALDH3A2P51648 485 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 GABPB1Q06547 395 aaPredicted RBP7.16□□□□□ -1.26
CNOT9-202ENST00000295701 MORN2Q502X0 79 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 FAM27D1Q5T7N8 215 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 LINC00596Q86U02 117 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF429Q86V71 674 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 APH1BQ8WW43 257 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 MUL1Q969V5 352 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 CPNE2Q96FN4 548 aaPredicted RBP7.16□□□□□ -1.26
CNOT9-202ENST00000295701 S100A13Q99584 98 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF184Q99676 751 aaPredicted RBP7.16□□□□□ -1.26
CNOT9-202ENST00000295701 NABP2Q9BQ15 211 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 MRPS18AQ9NVS2 196 aaKnown RBP7.16□□□□□ -1.26
CNOT9-202ENST00000295701 RCC2Q9P258 522 aaKnown RBP7.16□□□□□ -1.26
CNOT9-202ENST00000295701 ORC6Q9Y5N6 252 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 PEX16Q9Y5Y5 336 aa7.16□□□□□ -1.26
CNOT9-202ENST00000295701 LCE6AA0A183 80 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 A0A1W2PN81 502 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 MCRIP1C9JLW8 97 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 OGG1O15527 345 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 TXNL1O43396 289 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 IGHV3-11P01762 117 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 CD2P06729 351 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 OR5H8P0DN80 308 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 EGR2P11161 476 aaPredicted RBP7.15□□□□□ -1.26
CNOT9-202ENST00000295701 GTF2F2P13984 249 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 CHRNA7P36544 502 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 PPP3R1P63098 170 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 RAB40BQ12829 278 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 MRPL28Q13084 256 aaKnown RBP7.15□□□□□ -1.26
CNOT9-202ENST00000295701 SRSF7Q16629 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
CNOT9-202ENST00000295701 ECSCRQ19T08 205 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 C5orf64Q2M2E5 130 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 Q3ZCU0 254 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 C19orf54Q5BKX5 351 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 SIGIRRQ6IA17 410 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 RAB12Q6IQ22 244 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 RPL22L1Q6P5R6 122 aaKnown RBP7.15□□□□□ -1.26
CNOT9-202ENST00000295701 GLIPR1L1Q6UWM5 242 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 ADAMTSL5Q6ZMM2 481 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 STX19Q8N4C7 294 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 ZFP41Q8N8Y5 198 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 MINDY2Q8NBR6 621 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 ARPC1AQ92747 370 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF251Q9BRH9 671 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 TOLLIPQ9H0E2 274 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 FBXL15Q9H469 300 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 TAF9BQ9HBM6 251 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 OR2S2Q9NQN1 319 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 CLEC2DQ9UHP7 191 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 ZNF580Q9UK33 172 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 GAB2Q9UQC2 676 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 A3GALT2U3KPV4 340 aa7.15□□□□□ -1.26
CNOT9-202ENST00000295701 TRBV5-5A0A0J9YX44 114 aa7.14□□□□□ -1.27
CNOT9-202ENST00000295701 LOC100130705A0A1B0GUX0 176 aa7.14□□□□□ -1.27
CNOT9-202ENST00000295701 LINC01619G3V211 115 aa7.14□□□□□ -1.27
CNOT9-202ENST00000295701 FCN1O00602 326 aa7.14□□□□□ -1.27
CNOT9-202ENST00000295701 RGS13O14921 159 aa7.14□□□□□ -1.27
CNOT9-202ENST00000295701 NBR2O15453 112 aa7.14□□□□□ -1.27
CNOT9-202ENST00000295701 WBP4O75554 376 aaKnown RBP7.14□□□□□ -1.27
CNOT9-202ENST00000295701 CIB2O75838 187 aa7.14□□□□□ -1.27
CNOT9-202ENST00000295701 HLA-DRB1P01911 266 aa7.14□□□□□ -1.27
CNOT9-202ENST00000295701 RPS11P62280 158 aaKnown RBP eCLIP7.14□□□□□ -1.27
CNOT9-202ENST00000295701 RIPK1Q13546 671 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms