RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 RDH5Q92781 318 aa11.37□□□□□ -0.59
KCNIP3-201ENST00000295225 MSI2Q96DH6 328 aaKnown RBP11.37□□□□□ -0.59
KCNIP3-201ENST00000295225 CNOT1A5YKK6 2376 aaKnown RBP11.37□□□□□ -0.59
KCNIP3-201ENST00000295225 JTBO76095 146 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 GDF1P27539 372 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 SNCAP37840 140 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 DVL1P1P54792 670 aaPredicted RBP11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 RPS16P62249 146 aaKnown RBP11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 C10orf128Q5T292 105 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 OPN5Q6U736 354 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 RHBDD1Q8TEB9 315 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 TMEM171Q8WVE6 324 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 RBMXL1Q96E39 390 aaKnown RBP11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 PRRG4Q9BZD6 226 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 TMEM38BQ9NVV0 291 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 SPTBN2O15020 2390 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 IGSF23A1L1A6 192 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 FAM166BA8MTA8 275 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 FAM53AQ6NSI3 398 aaPredicted RBP11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 C20orf204Q6ZNR8 217 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 ZNF818PQ6ZRF7 136 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 OR51H1Q8NH63 302 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 RAB1BQ9H0U4 201 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 PLA2G3Q9NZ20 509 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 C5orf49A4QMS7 147 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 TMEM50AO95807 157 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 FGF7P21781 194 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 HERV-K104P61576 105 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 PDZD11Q5EBL8 140 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 GGNQ86UU5 652 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 GAPTQ8N292 157 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 DUSP23Q9BVJ7 150 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 CCL28Q9NRJ3 127 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 OR14J1Q9UGF5 321 aa11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 UBE2J1Q9Y385 318 aaPredicted RBP11.36□□□□□ -0.59
KCNIP3-201ENST00000295225 KALRNO60229 2985 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 SYNGR1O43759 233 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 TCN2P20062 427 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 GNRHRP30968 328 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 ZNF154Q13106 437 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 PSG3Q16557 428 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 TMEM249Q2WGJ8 235 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 LIAT1Q6ZQX7 453 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 TBC1D26Q86UD7 250 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 TUBD1Q9UJT1 453 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 TTC28Q96AY4 2481 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 ZNF724A8MTY0 619 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 PPYP01298 95 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 MDKP21741 143 aaPredicted RBP11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 ATP5IP56385 69 aaPredicted RBP11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 RBPJQ06330 500 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 OR2H1Q9GZK4 316 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 USF3Q68DE3 2245 aa11.35□□□□□ -0.59
KCNIP3-201ENST00000295225 RELNP78509 3460 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 H0YL77 283 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 TFF1P04155 84 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 P04436 131 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 SCGB1A1P11684 91 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 ID1P41134 155 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 ATP5J2P56134 94 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 B3GALT5-AS1P59052 145 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 MRPS34P82930 218 aaKnown RBP11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 EWSR1Q01844 656 aaKnown RBP eCLIP11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 MALLQ13021 153 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 OR2G3Q8NGZ4 309 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 HPSE2Q8WWQ2 592 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 DAZAP1Q96EP5 407 aaKnown RBP11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 CDX2Q99626 313 aaPredicted RBP11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 PARP11Q9NR21 331 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 YAE1D1Q9NRH1 226 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 STRAPQ9Y3F4 350 aaKnown RBP11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 LIPGQ9Y5X9 500 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 C3orf85A0A1B0GTC6 90 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 E5RGE8 158 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 ROS1P08922 2347 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 HERPUD1Q15011 391 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 EIF5AL1Q6IS14 154 aaKnown RBP11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 FAM58AQ8N1B3 248 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 OR5C1Q8NGR4 320 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 CLDN23Q96B33 292 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 SCRT1Q9BWW7 348 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 PKIBQ9C010 78 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 NSG2Q9Y328 171 aa11.34□□□□□ -0.59
KCNIP3-201ENST00000295225 TRAV26-1A0A087WT03 109 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 A0A0G2JRQ6 117 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 C9J4A7 227 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 ST8SIA3O43173 380 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 YIF1AO95070 293 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 IRF2P14316 349 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 ATP6V0CP27449 155 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 TMEM267Q0VDI3 215 aaPredicted RBP11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 RAB35Q15286 201 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 ARV1Q9H2C2 271 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 ZNF286AQ9HBT8 521 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 SMCO4Q9NRQ5 59 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 KIAA1549Q9HCM3 1950 aa11.33□□□□□ -0.6
KCNIP3-201ENST00000295225 HMGB3O15347 200 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms