RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 CDIPTO14735 213 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 SFTA3P0C7M3 94 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 TNFSF4P23510 183 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 UCP1P25874 307 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 PAX6P26367 422 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 SPIN3Q5JUX0 258 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 ZNF880Q6PDB4 577 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 VHLLQ6RSH7 139 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 Q6ZR03 302 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 TBC1D26Q86UD7 250 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 OR2Z1Q8NG97 314 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 DIRC2Q96SL1 478 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 MSL2Q9HCI7 577 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 UBE2J1Q9Y385 318 aaPredicted RBP14.14□□□□□ -0.15
CPSF4-201ENST00000292476 PRELID3BQ9Y3B1 194 aa14.14□□□□□ -0.15
CPSF4-201ENST00000292476 FAM157AC9JC47 383 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 NPIPB11E5RHQ5 1161 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 PITX3O75364 302 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 NXPH2O95156 264 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 ZNF205O95201 554 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 CLDN1O95832 211 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 AGAP20933 346 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 S100GP29377 79 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 ERVK11-1P61568 191 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 ZNF266Q14584 549 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 PDCD1Q15116 288 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 NCMAPQ5T1S8 102 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 WDR86Q86TI4 376 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 ZNF695Q8IW36 515 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 CMTM1Q8IZ96 169 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 ZNF808Q8N4W9 903 aaPredicted RBP14.13□□□□□ -0.15
CPSF4-201ENST00000292476 LFNGQ8NES3 379 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 OR5D13Q8NGL4 314 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 ITLN2Q8WWU7 325 aaPredicted RBP14.13□□□□□ -0.15
CPSF4-201ENST00000292476 KIRREL1Q96J84 757 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 SMIM3Q9BZL3 60 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 SLC25A31Q9H0C2 315 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 WFDC1Q9HC57 220 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 TAAR3PQ9P1P4 343 aa14.13□□□□□ -0.15
CPSF4-201ENST00000292476 HEATR1Q9H583 2144 aaKnown RBP14.13□□□□□ -0.15
CPSF4-201ENST00000292476 A6NLC8 198 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 H0Y980 276 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 RHBDL1O75783 438 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 PTBP3O95758 552 aaKnown RBP14.12□□□□□ -0.15
CPSF4-201ENST00000292476 TSPAN15O95858 294 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 LMO1P25800 156 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 NKX2-1P43699 371 aaPredicted RBP14.12□□□□□ -0.15
CPSF4-201ENST00000292476 PEA15Q15121 130 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 MOB1BQ7L9L4 216 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 SELENOHQ8IZQ5 122 aaKnown RBP14.12□□□□□ -0.15
CPSF4-201ENST00000292476 OR2C3Q8N628 320 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 OR10Z1Q8NGY1 313 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 CABLES2Q9BTV7 478 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 TMEM231Q9H6L2 316 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 TREM2Q9NZC2 230 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 FAM96BQ9Y3D0 163 aa14.12□□□□□ -0.15
CPSF4-201ENST00000292476 ASH1LQ9NR48 2969 aaKnown RBP14.12□□□□□ -0.15
CPSF4-201ENST00000292476 A0A1B0GW64 132 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 SH2D1BO14796 132 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 CD3EP07766 207 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 SLC25A6P12236 298 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 VDAC1P21796 283 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 SNCAP37840 140 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 MDH2P40926 338 aaKnown RBP14.11□□□□□ -0.15
CPSF4-201ENST00000292476 NPBWR1P48145 328 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 EWSR1Q01844 656 aaKnown RBP eCLIP14.11□□□□□ -0.15
CPSF4-201ENST00000292476 HERPUD1Q15011 391 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 ZNF146Q15072 292 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 HIST2H2BCQ6DN03 193 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 MEX3BQ6ZN04 569 aaKnown RBP14.11□□□□□ -0.15
CPSF4-201ENST00000292476 MRPL30Q8TCC3 161 aaKnown RBP14.11□□□□□ -0.15
CPSF4-201ENST00000292476 SECTM1Q8WVN6 248 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 MRPL37Q9BZE1 423 aaKnown RBP14.11□□□□□ -0.15
CPSF4-201ENST00000292476 SMDT1Q9H4I9 107 aa14.11□□□□□ -0.15
CPSF4-201ENST00000292476 FLNBO75369 2602 aaKnown RBP14.11□□□□□ -0.15
CPSF4-201ENST00000292476 NKX2-6A6NCS4 301 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 DEGS1O15121 323 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 NDUFA2O43678 99 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 SCTP09683 121 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 OR8U9P0C7N5 309 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 CFHR2P36980 270 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 BAXQ07812 192 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 CDSNQ15517 529 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 NMSQ5H8A3 153 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 ZNF818PQ6ZRF7 136 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 LRP11Q86VZ4 500 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 SUMF2Q8NBJ7 301 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 OR8U1Q8NH10 309 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 NEK7Q8TDX7 302 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 PLEKHF2Q9H8W4 249 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 HES4Q9HCC6 221 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 CACFD1Q9UGQ2 172 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 IL19Q9UHD0 177 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 UMAD1C9J7I0 102 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 CD80P33681 288 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 CAMLGP49069 296 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 HLA-DRB3P79483 266 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 SHEQ5VZ18 495 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 FAM90A1Q86YD7 464 aa14.1□□□□□ -0.15
CPSF4-201ENST00000292476 GAPTQ8N292 157 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms