RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 E9PLN8 166 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 CLDN14O95500 239 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 MT-ND4LP03901 98 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 REG1AP05451 166 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 EGR1P18146 543 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 FSTP19883 344 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 CHRNB4P30926 498 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 TCTAP57738 103 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 HMGN3Q15651 99 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 ZNF439Q8NDP4 499 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 OR10G4Q8NGN3 311 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 OR10G9Q8NGN4 311 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 OR10G7Q8NGN6 311 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 OR10D4PQ8NGN7 298 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 R3HDM4Q96D70 268 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 SGK494Q96LW2 274 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 WFIKKN1Q96NZ8 548 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 TAAR6Q96RI8 345 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 GPR132Q9UNW8 380 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 PLCE1Q9P212 2302 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 LY86O95711 162 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 HKR1P10072 659 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 G0S2P27469 103 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 SCAND1P57086 179 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 HLA-DRB3P79483 266 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 ACOT6Q3I5F7 207 aaPredicted RBP4.11□□□□□ -1.75
UBR1-201ENST00000290650 CA5BP1Q8WTZ4 195 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 HSD17B10Q99714 261 aaKnown RBP4.11□□□□□ -1.75
UBR1-201ENST00000290650 SLC35B3Q9H1N7 401 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 RAB9BQ9NP90 201 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 NDRG3Q9UGV2 375 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 OR2W1Q9Y3N9 320 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 J3KRW8 73 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 SYNGR2O43760 224 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 CYTIPO60759 359 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 ACTL6AO96019 429 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 HBZP02008 142 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 CRYBA1P05813 215 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 COX5AP20674 150 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 GLIPR1P48060 266 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 DLK1P80370 383 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 CEACAM21Q3KPI0 293 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 KHDC1LQ5JSQ8 128 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 WDR25Q64LD2 544 aaPredicted RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 LINC00518Q8N0U6 118 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 ZDHHC16Q969W1 377 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 SLC35E1Q96K37 410 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 USB1Q9BQ65 265 aaKnown RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 TMPRSS5Q9H3S3 457 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 RNF122Q9H9V4 155 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 TRAV14DV4A0A0A6YYC5 116 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 PIGBOS1A0A0B4J2F0 54 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 A0A1B0GTI1 187 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 DNASE2O00115 360 aaPredicted RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 OR2A4O95047 310 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 MMP7P09237 267 aaPredicted RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 WNT5AP41221 380 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 COMMD1Q8N668 190 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 CYB561D1Q8N8Q1 229 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 OR2A7Q96R45 310 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 OR51I2Q9H344 312 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 ZNF891A8MT65 544 aaPredicted RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 C21orf140B9A014 251 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 C9orf172C9J069 976 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 COX7A2P2O60397 106 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 DEDDO75618 318 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 EIF3IQ13347 325 aaKnown RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 RTP5Q14D33 572 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 PAQR4Q8N4S7 273 aaPredicted RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 LFNGQ8NES3 379 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 SNX22Q96L94 193 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 PTPRSQ13332 1948 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 KMT2EQ8IZD2 1858 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 OR5B21A6NL26 309 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 PHOX2AO14813 284 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 LILRA1O75019 489 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 GALR1P47211 349 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 THBS3P49746 956 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 C1orf100Q5SVJ3 147 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 CMTM2Q8TAZ6 248 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 ITLN1Q8WWA0 313 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 Q96M66 194 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 CLEC5AQ9NY25 188 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 DLL3Q9NYJ7 618 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 IL36GQ9NZH8 169 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 TRAV38-1A0A0B4J264 116 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 TMEM14DPA8MWL7 114 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 H3BTX0 84 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 NDUFB3O43676 98 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 MPV17P39210 176 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 RAB13P51153 203 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 ERHP84090 104 aaKnown RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 ZNF66Q6ZN08 573 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 TGIF2LXQ8IUE1 241 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 NHLRC2Q8NBF2 726 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 OR5A2Q8NGI9 324 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 OR5D13Q8NGL4 314 aa4.1□□□□□ -1.75
UBR1-201ENST00000290650 KLF14Q8TD94 323 aaPredicted RBP4.1□□□□□ -1.75
UBR1-201ENST00000290650 MARS2Q96GW9 593 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms