RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 FAM157BP0CG42 384 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 SPNS3Q6ZMD2 512 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 CBLN4Q9NTU7 201 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 DOLPP1Q86YN1 238 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 LSM10Q969L4 123 aaKnown RBP15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 PLP1P60201 277 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 RAC3P60763 192 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 ZXDAP98168 799 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 OR4P4Q8NGL7 312 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 WFDC6Q9BQY6 131 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 MRPL18Q9H0U6 180 aaKnown RBP15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 DTX4Q9Y2E6 619 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 RNF222A6NCQ9 220 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 SSX8Q7RTT4 187 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 SPRED2Q7Z698 418 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 TAF15Q92804 592 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 PSG11Q9UQ72 335 aa15.24■□□□□ 0.03
PCDHA13-201ENST00000289272 NCBP2LA6PVI3 153 aaKnown RBP15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 FAM157CP0CG43 387 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 KLK2P20151 261 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 ERVFRD-1P60508 538 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 Q56UQ5 140 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 PLA2G3Q9NZ20 509 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 TMEM238LA0A1B0GVL6 79 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 NPIPB13A6NJU9 1138 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 A6NJY4 79 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 NPIPB4C9JG80 1138 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 RFLNBQ8N5W9 214 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 TMEM45BQ96B21 275 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 PEF1Q9UBV8 284 aaKnown RBP15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 PILRAQ9UKJ1 303 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 RALYQ9UKM9 306 aaKnown RBP15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 J3QT63 122 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 CA2P00918 260 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 IGHMP01871 453 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 CLEC3BP05452 202 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 ZNF708P17019 499 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 ATRAIDQ6UW56 229 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 OR1L1Q8NH94 360 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 TMEM14DPA8MWL7 114 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 STARD6P59095 220 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 TFF2Q03403 129 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 WDR25Q64LD2 544 aaPredicted RBP15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 PMS2CLQ68D20 193 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 ATG2BQ96BY7 2078 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 C5orf52A6NGY3 159 aa15.23■□□□□ 0.03
PCDHA13-201ENST00000289272 A8MWL6 223 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 IGKV1D-16P01601 117 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 PPP1CCP36873 323 aaKnown RBP15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 PMELP40967 661 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 OPRK1P41145 380 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 MRPL54Q6P161 138 aaKnown RBP15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 OR10D3Q8NH80 312 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 TMEM230Q96A57 120 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 CD1BP29016 333 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 FNDC7Q5VTL7 733 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 CXXC4Q9H2H0 198 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 SEBOXQ9HB31 216 aaPredicted RBP15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 TMEM210A6NLX4 147 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 SMIM17P0DL12 118 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 GZMHP20718 246 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 UCNP55089 124 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 TMEM187Q14656 261 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 ACSM6Q6P461 480 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 CYP2G1PQ6ZSU1 146 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 MIEN1Q9BRT3 115 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 C19orf24Q9BVV8 132 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 HEXA-AS1Q9H8Q6 139 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 NPVFQ9HCQ7 196 aa15.22■□□□□ 0.03
PCDHA13-201ENST00000289272 TRAV14DV4A0A0A6YYC5 116 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 HINT1P49773 126 aaPredicted RBP15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 HERPUD1Q15011 391 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 OR10S1Q8NGN2 331 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 ZCCHC14Q8WYQ9 949 aaKnown RBP15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 MRGPRFQ96AM1 343 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 GAL3ST2Q9H3Q3 398 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 FOXJ2Q9P0K8 574 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 ZNF236Q9UL36 1845 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 IGLV1-36A0A0B4J1U3 117 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 SAPCD1Q5SSQ6 148 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 ZPLD1Q8TCW7 415 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 APOBEC4Q8WW27 367 aaKnown RBP15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 SCN3AQ9NY46 2000 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 ZNF665Q9H7R5 613 aa15.21■□□□□ 0.03
PCDHA13-201ENST00000289272 SRP19P09132 144 aaKnown RBP15.21■□□□□ 0.02
PCDHA13-201ENST00000289272 SFTPCP11686 197 aa15.21■□□□□ 0.02
PCDHA13-201ENST00000289272 LRRC10Q5BKY1 277 aa15.21■□□□□ 0.02
PCDHA13-201ENST00000289272 SAXO1Q8IYX7 474 aa15.21■□□□□ 0.02
PCDHA13-201ENST00000289272 SFRP2Q96HF1 295 aa15.21■□□□□ 0.02
PCDHA13-201ENST00000289272 RASL10BQ96S79 203 aa15.21■□□□□ 0.02
PCDHA13-201ENST00000289272 SFXN3Q9BWM7 321 aa15.21■□□□□ 0.02
PCDHA13-201ENST00000289272 SHISA3A0PJX4 238 aa15.2■□□□□ 0.02
PCDHA13-201ENST00000289272 IGHV4-34P06331 123 aa15.2■□□□□ 0.02
PCDHA13-201ENST00000289272 RARRES2Q99969 163 aa15.2■□□□□ 0.02
PCDHA13-201ENST00000289272 CHODLQ9H9P2 273 aa15.2■□□□□ 0.02
PCDHA13-201ENST00000289272 IGHV5-10-1A0A0J9YXX1 117 aa15.2■□□□□ 0.02
PCDHA13-201ENST00000289272 PRSS1P07477 247 aa15.2■□□□□ 0.02
PCDHA13-201ENST00000289272 PSG2P11465 335 aa15.2■□□□□ 0.02
PCDHA13-201ENST00000289272 TMEM108Q6UXF1 575 aa15.2■□□□□ 0.02
PCDHA13-201ENST00000289272 SELENOHQ8IZQ5 122 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms