RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 UBE2L5PA0A1B0GUS4 154 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 SIRPB1O00241 398 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 YKT6O15498 198 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 SYNGR4O95473 234 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 SERPINA7P05543 415 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 GPX4P36969 197 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 WNT5AP41221 380 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 SERF2P84101 59 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 TLE1Q04724 770 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 MRGPRGQ86SM5 289 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 APH1AQ96BI3 265 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 S100PBPQ96BU1 408 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 RHOVQ96L33 236 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 P2RX4Q99571 388 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 HES7Q9BYE0 225 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 WDR61Q9GZS3 305 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 DMDP11532 3685 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 MUC3AQ02505 3323 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 TMEM265A0A087WTH1 108 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 OR5B21A6NL26 309 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 FAM166BA8MTA8 275 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 PHOX2AO14813 284 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 WDR1O75083 606 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 WNT2P09544 360 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 ARR3P36575 388 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 DUSP3P51452 185 aaPredicted RBP11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 PLP2Q04941 152 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 GAMTQ14353 236 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 SPATA46Q5T0L3 261 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 Q6P435 159 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 OR2M7Q8NG81 312 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 ZNF703Q9H7S9 590 aaPredicted RBP11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 TMEM9BQ9NQ34 198 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 MPC1Q9Y5U8 109 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 FAM186AA6NE01 2351 aa11.21□□□□□ -0.61
SLC28A1-201ENST00000286749 TRBV24-1A0A075B6N3 115 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 A0A1W2PR80 420 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 LRP5LA4QPB2 252 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 NPIPB11E5RHQ5 1161 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 OPN1MWP04001 364 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 OPN1MW2P0DN77 364 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 OPN1MW3P0DN78 364 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 CLN3Q13286 438 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 WDR25Q64LD2 544 aaPredicted RBP11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 OR8G2PQ6IF36 304 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 TIPARPQ7Z3E1 657 aaKnown RBP11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 THOC3Q96J01 351 aaKnown RBP11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 OR51I2Q9H344 312 aa11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 LIN7CQ9NUP9 197 aaKnown RBP11.21□□□□□ -0.62
SLC28A1-201ENST00000286749 TGOLN2O43493 480 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 ZNF737O75373 536 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 IFNA1P01562 189 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 CD55P08174 381 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 SLC38A11Q08AI6 406 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 ADIRFQ15847 76 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 DCAF12Q5T6F0 453 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 ZNF600Q6ZNG1 722 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 TAF15Q92804 592 aaKnown RBP eCLIP11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 LHX4Q969G2 390 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 SMIM7Q9BQ49 75 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 TRAPPC2LQ9UL33 140 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 HMGB3O15347 200 aaKnown RBP11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 IGKV1D-33P01593 117 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 IGKV1-33P01594 117 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 SSPNQ14714 243 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 PACRGQ96M98 296 aaPredicted RBP11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 GUCD1Q96NT3 240 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 FAM173AQ9BQD7 235 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 PKIBQ9C010 78 aa11.2□□□□□ -0.62
SLC28A1-201ENST00000286749 DOCK11Q5JSL3 2073 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 J3QT63 122 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 NEURL1O76050 574 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 APLNRP35414 380 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 MAGEA5P43359 124 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 CD81P60033 236 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 C3AR1Q16581 482 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 ACSF3Q4G176 576 aaPredicted RBP11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 C6orf15Q6UXA7 325 aaPredicted RBP11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 NUFIP2Q7Z417 695 aaKnown RBP11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 DEFB123Q8N688 67 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 NECAP1Q8NC96 275 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 PINX1Q96BK5 328 aaKnown RBP11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 CDX2Q99626 313 aaPredicted RBP11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 HIST1H2BLQ99880 126 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 CTDSP1Q9GZU7 261 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 CDH20Q9HBT6 801 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 SLC39A9Q9NUM3 307 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 OR2H2O95918 312 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 CEACAM6P40199 344 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 MEF2BQ02080 365 aaPredicted RBP11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 NCR3LG1Q68D85 454 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 ZNF497Q6ZNH5 498 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 MOB1BQ7L9L4 216 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 C16orf82Q7Z2V1 217 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 DRAM1Q8N682 238 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 OR10A7Q8NGE5 316 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 OR4X1Q8NH49 305 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 B4GALT7Q9UBV7 327 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms