RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 DRAM1Q8N682 238 aa17.45■□□□□ 0.38
YBX3-202ENST00000279550 RBPMSQ93062 196 aaKnown RBP17.45■□□□□ 0.38
YBX3-202ENST00000279550 GALMQ96C23 342 aa17.45■□□□□ 0.38
YBX3-202ENST00000279550 BSCL2Q96G97 398 aaPredicted RBP17.45■□□□□ 0.38
YBX3-202ENST00000279550 C5orf30Q96GV9 206 aa17.45■□□□□ 0.38
YBX3-202ENST00000279550 REG4Q9BYZ8 158 aa17.45■□□□□ 0.38
YBX3-202ENST00000279550 IL19Q9UHD0 177 aa17.45■□□□□ 0.38
YBX3-202ENST00000279550 RCL1Q9Y2P8 373 aaKnown RBP17.45■□□□□ 0.38
YBX3-202ENST00000279550 RBM7Q9Y580 266 aaKnown RBP17.45■□□□□ 0.38
YBX3-202ENST00000279550 KLF2Q9Y5W3 355 aaPredicted RBP17.45■□□□□ 0.38
YBX3-202ENST00000279550 TEX46H3BTG2 121 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 WNT2P09544 360 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 PAX5Q02548 391 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 EFNB3Q15768 340 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 DMBX1Q8NFW5 382 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 LURAP1Q96LR2 239 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 RNF7Q9UBF6 113 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 A0A0G2JRQ6 117 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 C15orf65H3BRN8 121 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 CYB5R3P00387 301 aaPredicted RBP17.44■□□□□ 0.38
YBX3-202ENST00000279550 SELLP14151 372 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 S100GP29377 79 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 PPP1CCP36873 323 aaKnown RBP17.44■□□□□ 0.38
YBX3-202ENST00000279550 AANATQ16613 207 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 ANGPTL6Q8NI99 470 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 RFESDQ8TAC1 157 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 IL22RA2Q969J5 263 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 PHYHIPLQ96FC7 376 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 AKR1E2Q96JD6 320 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 SNX22Q96L94 193 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 C11orf1Q9H5F2 150 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 DCAF16Q9NXF7 216 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 RNF150Q9ULK6 438 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 POMT1Q9Y6A1 747 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 COL12A1Q99715 3063 aa17.44■□□□□ 0.38
YBX3-202ENST00000279550 FAM208BQ5VWN6 2430 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 IGHV3-43A0A0B4J1X8 118 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 DUXBA0A1W2PPF3 345 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 E5RGE8 158 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 ST8SIA3O43173 380 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 IGKV1-39P01597 117 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 IGKV1D-39P04432 117 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 IGHV3-43DP0DP04 118 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 MST1LQ2TV78 715 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 PDZD9Q8IXQ8 264 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 ZNRF1Q8ND25 227 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 ARL11Q969Q4 196 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 TOLLIPQ9H0E2 274 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 SLC25A32Q9H2D1 315 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 ZC4H2Q9NQZ6 224 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 NSG2Q9Y328 171 aa17.43■□□□□ 0.38
YBX3-202ENST00000279550 CHD6Q8TD26 2715 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 A0A1B0GW55 424 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 C17orf100A8MU93 164 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 B9A039 149 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 ADH4P08319 380 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DUX4L2P0CJ85 424 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DUX4L3P0CJ86 424 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DUX4L4P0CJ87 422 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DUX4L5P0CJ88 424 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DUX4L6P0CJ89 424 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DUX4L7P0CJ90 424 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 TPT1P13693 172 aaKnown RBP17.42■□□□□ 0.38
YBX3-202ENST00000279550 TNFSF4P23510 183 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DUX4L9Q6RFH8 374 aaPredicted RBP17.42■□□□□ 0.38
YBX3-202ENST00000279550 CLEC9AQ6UXN8 241 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 MUC15Q8N387 334 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 ERGIC1Q969X5 290 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DIRC2Q96SL1 478 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 DUX4Q9UBX2 424 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 FBXL17Q9UF56 701 aa17.42■□□□□ 0.38
YBX3-202ENST00000279550 UBR5O95071 2799 aaPredicted RBP17.41■□□□□ 0.38
YBX3-202ENST00000279550 ODAMA1E959 279 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 MGST3O14880 152 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 CXorf66Q5JRM2 361 aaPredicted RBP17.41■□□□□ 0.38
YBX3-202ENST00000279550 RPL7L1Q6DKI1 246 aaKnown RBP17.41■□□□□ 0.38
YBX3-202ENST00000279550 BAP18Q8IXM2 172 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 ZCCHC24Q8N2G6 241 aaKnown RBP17.41■□□□□ 0.38
YBX3-202ENST00000279550 Q8TCH9 128 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 SPIN2AQ99865 258 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 SPIN2BQ9BPZ2 258 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 PLEKHA2Q9HB19 425 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 OR2S2Q9NQN1 319 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 MED9Q9NWA0 146 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 ROS1P08922 2347 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 ICE1Q9Y2F5 2266 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 CLEC18AA5D8T8 446 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 K7N7A8 449 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 VDAC1P21796 283 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 ZNF585BQ52M93 769 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 TOR2AQ5JU69 321 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 CLEC18CQ8NCF0 446 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 GPR146Q96CH1 333 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 SMIM3Q9BZL3 60 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 OR2D2Q9H210 308 aa17.41■□□□□ 0.38
YBX3-202ENST00000279550 DOPEY1Q5JWR5 2465 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 CACNA1DQ01668 2161 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 MFSD2BA6NFX1 497 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 SERPINE2P07093 398 aa17.4■□□□□ 0.38
YBX3-202ENST00000279550 ZNF16P17020 682 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms