RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 KIAA0141Q14154 515 aaPredicted RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 OR1C1Q15619 314 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 SSX2Q16385 188 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 BATFQ16520 125 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 ZNF239Q16600 458 aaKnown RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 PABPC1L2AQ5JQF8 200 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 TSPO2Q5TGU0 170 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 OR2T2Q6IF00 324 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 CD200R1LQ6Q8B3 271 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 DRAM2Q6UX65 266 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 WDSUB1Q8N9V3 476 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 OR5M9Q8NGP3 310 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 OR8U1Q8NH10 309 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 OR6X1Q8NH79 312 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 OR10D3Q8NH80 312 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 RXFP4Q8TDU9 374 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 HPSE2Q8WWQ2 592 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 HGDQ93099 445 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 ADAT3Q96EY9 351 aaPredicted RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 PGLYRP3Q96LB9 341 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 LINC00052Q96N35 136 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 SDHCQ99643 169 aaPredicted RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 SSBP3Q9BWW4 388 aaPredicted RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 DYNLRB1Q9NP97 96 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 OPN4Q9UHM6 478 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 ERRFI1Q9UJM3 462 aaPredicted RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 EPG5Q9HCE0 2579 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 TNRC6AQ8NDV7 1962 aaKnown RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 A0A1W2PQD3 144 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 SLC22A20A6NK97 555 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 HMSDA8MTL9 139 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 PATE3B3GLJ2 98 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 C17orf112F2Z3M2 114 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 J3QR06 171 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 PIN1P1O15428 100 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 ZNHIT1O43257 154 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 TBX6O95947 436 aaPredicted RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 KRASP01116 189 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 GP1BAP07359 652 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 ASAH2BP0C7U1 165 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 SMIM10L1P0DMW3 83 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 GABRA1P14867 456 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 CA6P23280 308 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 KIR3DL2P43630 455 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 HOXA1P49639 335 aaPredicted RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 PSMB3P49720 205 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 RAB5CP51148 216 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 B3GALT5-AS1P59052 145 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 SIGLEC14Q08ET2 396 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 NAA40Q86UY6 237 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 ADAD2Q8NCV1 583 aaKnown RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 SLC26A10Q8NG04 563 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 OR11G2Q8NGC1 345 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 RFESDQ8TAC1 157 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 NUBPLQ8TB37 319 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 H1FXQ92522 213 aaKnown RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 RAB39BQ96DA2 213 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 SMIM10Q96HG1 83 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 NDUFAF3Q9BU61 184 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 AICDAQ9GZX7 198 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 WDR13Q9H1Z4 485 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 RAB9BQ9NP90 201 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 MED9Q9NWA0 146 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 MRPL22Q9NWU5 206 aaKnown RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 RPH3ALQ9UNE2 315 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 WDR83OSQ9Y284 106 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 RCL1Q9Y2P8 373 aaKnown RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 KLF13Q9Y2Y9 288 aaPredicted RBP2.46□□□□□ -2.02
HERC4-201ENST00000277817 PRELID3BQ9Y3B1 194 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 NEUROG3Q9Y4Z2 214 aa2.46□□□□□ -2.02
HERC4-201ENST00000277817 A0A1W2PNV4 684 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TUBAL3A6NHL2 446 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RS1O15537 224 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CST4P01036 141 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 MT-ND4LP03901 98 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 GAPDHP04406 335 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR5AC1P0C628 307 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 SFTA3P0C7M3 94 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CCL3P10147 92 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 NDUFB7P17568 137 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 GPR12P47775 334 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RAB35Q15286 201 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 MPPED2Q15777 294 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 CD300EQ496F6 205 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 MIDNQ504T8 468 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 Q5BKY6 102 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 GGNBP1Q5YKI7 109 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RPL7L1Q6DKI1 246 aaKnown RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 KCNIP4Q6PIL6 250 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 WDR74Q6RFH5 385 aaPredicted RBP2.45□□□□□ -2.02
HERC4-201ENST00000277817 HIST2H3AQ71DI3 136 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 Q7L0L9 218 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 NECAP1Q8NC96 275 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR5M8Q8NGP6 311 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 OR1J1Q8NGS3 322 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 RPS4Y2Q8TD47 263 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 ASB13Q8WXK3 278 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 C22orf15Q8WYQ4 148 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 DPF1Q92782 380 aa2.45□□□□□ -2.02
HERC4-201ENST00000277817 TNFRSF14Q92956 283 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms