RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 F2RP25116 425 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 MST1P26927 711 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 MPLP40238 635 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 COL5A1-AS1Q5SY13 56 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 OR4P4Q8NGL7 312 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 ABHD14AQ9BUJ0 271 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 SCN8AQ9UQD0 1980 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 HEATR5AQ86XA9 2040 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 RHOBP62745 196 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 Q56UQ5 140 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 TRAT1Q6PIZ9 186 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 SMIM15Q7Z3B0 74 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 SARAFQ96BY9 339 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 RTBDNQ9BSG5 229 aaPredicted RBP9.99□□□□□ -0.81
VPS33A-201ENST00000267199 IER2Q9BTL4 223 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 IGKV3D-11A0A0A0MRZ8 115 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 A0A1B0GU03 582 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 A0A1W2PPE3 182 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 OR5B21A6NL26 309 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 TIAF1O95411 115 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 HINT1P49773 126 aaPredicted RBP9.99□□□□□ -0.81
VPS33A-201ENST00000267199 RBM11P57052 281 aaKnown RBP9.99□□□□□ -0.81
VPS33A-201ENST00000267199 RNPS1Q15287 305 aaKnown RBP9.99□□□□□ -0.81
VPS33A-201ENST00000267199 ATP6V1FQ16864 119 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 SPNS3Q6ZMD2 512 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 CISD2Q8N5K1 135 aaKnown RBP9.99□□□□□ -0.81
VPS33A-201ENST00000267199 CT55Q8WUE5 264 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 OR4C12Q96R67 309 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 RPRMQ9NS64 109 aa9.99□□□□□ -0.81
VPS33A-201ENST00000267199 FGF16O43320 207 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 DEFA4P12838 97 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 GNB1P62873 340 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 HSD17B10Q99714 261 aaKnown RBP9.98□□□□□ -0.81
VPS33A-201ENST00000267199 ANGPTL4Q9BY76 406 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 WDR54Q9H977 334 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 COA4Q9NYJ1 87 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 PHF3Q92576 2039 aaKnown RBP9.98□□□□□ -0.81
VPS33A-201ENST00000267199 CDIPTO14735 213 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 SOD3P08294 240 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 ZNF735P0CB33 412 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 MEOX1P50221 254 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 PSG4Q00888 419 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 TMEM187Q14656 261 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 COL19A1Q14993 1142 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 PSG5Q15238 335 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 MOB1BQ7L9L4 216 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 Q8IYB0 196 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 MAFAQ8NHW3 353 aaPredicted RBP9.98□□□□□ -0.81
VPS33A-201ENST00000267199 TP53RKQ96S44 253 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 OR1A1Q9P1Q5 309 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 IGSF23A1L1A6 192 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 RPL36A-HNRNPH2H7BZ11 118 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 LYZL6O75951 148 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 FAM157CP0CG43 387 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 PMELP40967 661 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 SMIM21Q3B7S5 101 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 FAM117AQ9C073 453 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 DOCK7Q96N67 2140 aa9.98□□□□□ -0.81
VPS33A-201ENST00000267199 LRRC3CA6NJW4 275 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 SCGB2A1O75556 95 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 CT45A10P0DMU9 189 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 ERHP84090 104 aaKnown RBP9.97□□□□□ -0.81
VPS33A-201ENST00000267199 RTP5Q14D33 572 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 ELOBQ15370 118 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 SNAI3Q3KNW1 292 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 HIKESHIQ53FT3 197 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 GFI1BQ5VTD9 330 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 DEFB123Q8N688 67 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 WDR61Q9GZS3 305 aaKnown RBP9.97□□□□□ -0.81
VPS33A-201ENST00000267199 C5orf52A6NGY3 159 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 UBE2CO00762 179 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 SERF2P84101 59 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 LYG1Q8N1E2 194 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 MOB3AQ96BX8 217 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 MPC1Q9Y5U8 109 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 ANAPC1Q9H1A4 1944 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 NOTCH4Q99466 2003 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 DNPH1O43598 174 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 IGHMP01871 453 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 HOXB1P14653 301 aaPredicted RBP9.97□□□□□ -0.81
VPS33A-201ENST00000267199 GNG10P50151 68 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 TAS2R60P59551 318 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 KIAA1644Q3SXP7 199 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 BLNKQ8WV28 456 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 BOD1Q96IK1 185 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 TECRQ9NZ01 308 aaKnown RBP9.97□□□□□ -0.81
VPS33A-201ENST00000267199 A0A1W2PQM1 296 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
VPS33A-201ENST00000267199 LINC00271P0C7V0 271 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 MAGEA5P43359 124 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 GPR146Q96CH1 333 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 SLC45A2Q9UMX9 530 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 PROCRQ9UNN8 238 aa9.97□□□□□ -0.81
VPS33A-201ENST00000267199 ADCYAP1P18509 176 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 SUB1P53999 127 aaKnown RBP eCLIP9.96□□□□□ -0.81
VPS33A-201ENST00000267199 WDR73Q6P4I2 378 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 FAM122AQ96E09 287 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 PI4KAP42356 2102 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 THSD7BQ9C0I4 1608 aa9.96□□□□□ -0.81
VPS33A-201ENST00000267199 PMS2P1A4D2B8 440 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms