RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 BMI1P35226 326 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 C19orf48Q6RUI8 117 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 LINC00114Q6XXX2 140 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 LINC00470Q9BZP3 86 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 TMEM54Q969K7 222 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 IL19Q9UHD0 177 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 RBFOX3A6NFN3 312 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 GYPAP02724 150 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 CRYBA1P05813 215 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 S100A4P26447 101 aaKnown RBP13.27□□□□□ -0.28
TIMP3-201ENST00000266085 LGALS7P47929 136 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 UBE2L3P68036 154 aaKnown RBP13.27□□□□□ -0.28
TIMP3-201ENST00000266085 FAM162BQ5T6X4 162 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 OR1L8Q8NGR8 309 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 AQP3Q92482 292 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 RTN4RQ9BZR6 473 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 NEUROG3Q9Y4Z2 214 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 LIPGQ9Y5X9 500 aa13.27□□□□□ -0.28
TIMP3-201ENST00000266085 ZNF345Q14585 488 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF586Q9NXT0 402 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 DLL3Q9NYJ7 618 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 TNFSF18Q9UNG2 199 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 LOC390937A0A1W2PQ73 354 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 K7N7A8 449 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 GOSR1O95249 250 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 FADS6Q8N9I5 356 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 ANGPTL6Q8NI99 470 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 SSMEM1Q8WWF3 244 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 ABHD14AQ9BUJ0 271 aa13.27□□□□□ -0.29
TIMP3-201ENST00000266085 LYZP61626 148 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 FAM78BQ5VT40 261 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 TMUB1Q9BVT8 246 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 CLCF1Q9UBD9 225 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 ZDHHC8Q9ULC8 765 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 FREM3P0C091 2139 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 J3QR06 171 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 GNG7O60262 68 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 REG1BP48304 166 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 GNG4P50150 75 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 BLNKQ8WV28 456 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 ZCCHC14Q8WYQ9 949 aaKnown RBP13.26□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM18Q96B42 140 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 RNF2Q99496 336 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 J3QW42 95 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 SRP14P37108 136 aaKnown RBP13.26□□□□□ -0.29
TIMP3-201ENST00000266085 DCAF12L2Q5VW00 463 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 VWA1Q6PCB0 445 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 DOLPP1Q86YN1 238 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 SNX22Q96L94 193 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 Q96M66 194 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM167BQ9NRX6 74 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 TECRQ9NZ01 308 aaKnown RBP13.26□□□□□ -0.29
TIMP3-201ENST00000266085 SIP14410 1827 aa13.26□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM14DPA8MWL7 114 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 MMDQ15546 238 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 SAXO1Q8IYX7 474 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 SIGLECL1Q8N7X8 197 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 OR10A7Q8NGE5 316 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF714Q96N38 554 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 SEC11BP0C7V7 166 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM65Q6PI78 240 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
TIMP3-201ENST00000266085 WDR81Q562E7 1941 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 HPRT1P00492 218 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 RCC1P18754 421 aaPredicted RBP13.25□□□□□ -0.29
TIMP3-201ENST00000266085 KLRB1Q12918 225 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF705AQ6ZN79 300 aaPredicted RBP13.25□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM45BQ96B21 275 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 ABHD14BQ96IU4 210 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 RHOVQ96L33 236 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 RASL11BQ9BPW5 248 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 NPDC1Q9NQX5 325 aaPredicted RBP13.25□□□□□ -0.29
TIMP3-201ENST00000266085 SHISA3A0PJX4 238 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF708P17019 499 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 ARTNQ5T4W7 220 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 CCDC144NLQ6NUI1 221 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 SHISA5Q8N114 240 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF596Q8TC21 504 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 GRAMD2BQ96HH9 432 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 PCGF1Q9BSM1 259 aa13.25□□□□□ -0.29
TIMP3-201ENST00000266085 WDR61Q9GZS3 305 aaKnown RBP13.25□□□□□ -0.29
TIMP3-201ENST00000266085 MED13LQ71F56 2210 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 HSBP1O75506 76 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 MYPOPQ86VE0 399 aaPredicted RBP13.24□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF837Q96EG3 531 aaPredicted RBP13.24□□□□□ -0.29
TIMP3-201ENST00000266085 DOCK7Q96N67 2140 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 ODAMA1E959 279 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM218A2RU14 115 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 CEBPDP49716 269 aaPredicted RBP13.24□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM255AQ5JRV8 349 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 NSUN5P2Q63ZY6 315 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 MRGPRGQ86SM5 289 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM222Q9H0R3 208 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 RNF115Q9Y4L5 304 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.24□□□□□ -0.291e-8■□□□□ 9.6
TIMP3-201ENST00000266085 H0Y980 276 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 B2MP61769 119 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF66Q6ZN08 573 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 FAM24BQ8N5W8 94 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 GCSAMQ8N6F7 178 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms