RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SDK1Q7Z5N4 2213 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 IGLV3-12A0A075B6K2 115 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 C5orf63A6NC05 138 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 C2orf72A6NCS6 295 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 PPYP01298 95 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 IGHEP01854 428 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 FAHP16930 419 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 GNRHRP30968 328 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 OTX1P32242 354 aaPredicted RBP11.22□□□□□ -0.61
NUP54-201ENST00000264883 COMPP49747 757 aaPredicted RBP11.22□□□□□ -0.61
NUP54-201ENST00000264883 CNN3Q15417 329 aaKnown RBP11.22□□□□□ -0.61
NUP54-201ENST00000264883 SPIN3Q5JUX0 258 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 CARD17Q5XLA6 110 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 BRICD5Q6PL45 260 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 ANKRD37Q7Z713 158 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 ZNF738Q8NE65 137 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 NUDT10Q8NFP7 164 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 PARD6GQ9BYG4 376 aaPredicted RBP11.22□□□□□ -0.61
NUP54-201ENST00000264883 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
NUP54-201ENST00000264883 UQCR10Q9UDW1 63 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 PIGLQ9Y2B2 252 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 TECTAO75443 2155 aa11.22□□□□□ -0.61
NUP54-201ENST00000264883 BDP1A6H8Y1 2624 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 VENTXO95231 258 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 VDAC1P21796 283 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 HNRNPA3P51991 378 aaKnown RBP11.21□□□□□ -0.61
NUP54-201ENST00000264883 MSMO1Q15800 293 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 TMEM144Q7Z5S9 345 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 OR2D3Q8NGH3 330 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 PINX1Q96BK5 328 aaKnown RBP11.21□□□□□ -0.61
NUP54-201ENST00000264883 TXN2Q99757 166 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 COX11Q9Y6N1 276 aa11.21□□□□□ -0.61
NUP54-201ENST00000264883 IGHV1OR21-1A0A087WYE8 117 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 PIAS2O75928 621 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 CLDN17P56750 224 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 SUMO1P63165 101 aaKnown RBP11.21□□□□□ -0.62
NUP54-201ENST00000264883 SPATA45Q537H7 98 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 Q6ZN92 141 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 LINC01551Q86U37 167 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 OR4C5Q8NGB2 326 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 KCNE4Q8WWG9 221 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 SPTSSAQ969W0 71 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 CCDC74BQ96LY2 380 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 VPS25Q9BRG1 176 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 TNRC6BQ9UPQ9 1833 aaKnown RBP11.21□□□□□ -0.62
NUP54-201ENST00000264883 NCOR1O75376 2440 aa11.21□□□□□ -0.62
NUP54-201ENST00000264883 OR6C6A6NF89 314 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 ANGPTL7O43827 346 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 SERF1AO75920 110 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 OR2J2O76002 312 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 ESDP10768 282 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 UBE2G2P60604 165 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 SHBQ15464 509 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 Q6ZVH6 145 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 TCF23Q7RTU1 214 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 SLC24A4Q8NFF2 622 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 METTL7AQ9H8H3 244 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 ZDHHC11Q9H8X9 412 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 TAAR3PQ9P1P4 343 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 CHTOPQ9Y3Y2 248 aaKnown RBP11.2□□□□□ -0.62
NUP54-201ENST00000264883 CBR3O75828 277 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 CTRLP40313 264 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 LINC00310P59036 64 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 DEFB133Q30KQ1 61 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 RHBDD2Q6NTF9 364 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 ASCL4Q6XD76 172 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 OR2M3Q8NG83 312 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 TMEM54Q969K7 222 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 APH1AQ96BI3 265 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 ZNF501Q96CX3 271 aaPredicted RBP11.2□□□□□ -0.62
NUP54-201ENST00000264883 GPHA2Q96T91 129 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 SAMD10Q9BYL1 202 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 MYO7BQ6PIF6 2116 aa11.2□□□□□ -0.62
NUP54-201ENST00000264883 CABIN1Q9Y6J0 2220 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 SHISA8B8ZZ34 492 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 M0R135 149 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 VAMP5O95183 116 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 PTGDSP41222 190 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 LRRC75BQ2VPJ9 315 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 CLEC2AQ6UVW9 174 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 UNQ5815/PRO19632Q6UWF5 114 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 LHFPL2Q6ZUX7 228 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 WDR5BQ86VZ2 330 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 ZNF525Q8N782 197 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 ZNF799Q96GE5 643 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 RNF2Q99496 336 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 RBM24Q9BX46 236 aaKnown RBP11.19□□□□□ -0.62
NUP54-201ENST00000264883 IL36GQ9NZH8 169 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 ZNF391Q9UJN7 358 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 PIGBOS1A0A0B4J2F0 54 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 ZNF814B7Z6K7 855 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 F5H5K5 113 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 M0R296 226 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 HS3ST1O14792 307 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 HMGB3O15347 200 aaKnown RBP11.19□□□□□ -0.62
NUP54-201ENST00000264883 SPRY1O43609 319 aaPredicted RBP11.19□□□□□ -0.62
NUP54-201ENST00000264883 MPLP40238 635 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms