RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 ARID1AO14497 2285 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 HIVEP3Q5T1R4 2406 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 A0A1B0GW55 424 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 NKX6-3A6NJ46 265 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 LGALS8O00214 317 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DUX4L2P0CJ85 424 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DUX4L3P0CJ86 424 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DUX4L4P0CJ87 422 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DUX4L5P0CJ88 424 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DUX4L6P0CJ89 424 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DUX4L7P0CJ90 424 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 SMCO1Q147U7 214 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 ESCO2Q56NI9 601 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DUX4L9Q6RFH8 374 aaPredicted RBP13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 FOXRED2Q8IWF2 684 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DRAM1Q8N682 238 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 ZNF645Q8N7E2 425 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 OR1S1Q8NH92 325 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 RFESDQ8TAC1 157 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 CCL13Q99616 98 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 OR2D2Q9H210 308 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 DUX4Q9UBX2 424 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 KALRNO60229 2985 aa13.06□□□□□ -0.32
FOXRED1-201ENST00000263578 TRAV38-1A0A0B4J264 116 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 PIGBOS1A0A0B4J2F0 54 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 DEFB108AA8MXU0 73 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 TMEM178BH3BS89 294 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 SIGLEC5O15389 551 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 SCGB1D2O95969 90 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 NUP62P37198 522 aaPredicted RBP13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 ZNF672Q499Z4 452 aaPredicted RBP13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 C4orf17Q53FE4 359 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 FAM53AQ6NSI3 398 aaPredicted RBP13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 RRNAD1Q96FB5 475 aaKnown RBP13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 SPIN2AQ99865 258 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 SPIN2BQ9BPZ2 258 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 LIN7CQ9NUP9 197 aaKnown RBP13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 IGHV3-43A0A0B4J1X8 118 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 KCNAB3O43448 404 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 DEDDO75618 318 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 SERPINE2P07093 398 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 IGHV3-43DP0DP04 118 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 LOXP28300 417 aaPredicted RBP13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 OR8H3Q8N146 312 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 ZBTB34Q8NCN2 500 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 TMEM204Q9BSN7 226 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 TMEM106BQ9NUM4 274 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 JPT1Q9UK76 154 aa13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 LSM5Q9Y4Y9 91 aaKnown RBP13.05□□□□□ -0.32
FOXRED1-201ENST00000263578 RNF212BA8MTL3 300 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 MBPP02686 304 aaPredicted RBP13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 RLN2P04090 185 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 UQCRFS1P47985 274 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 UBA52P62987 128 aaKnown RBP13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 MSMO1Q15800 293 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 MUC15Q8N387 334 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 OR52M1Q8NGK5 317 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 CCL17Q92583 94 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 AQP10Q96PS8 301 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 RAB9BQ9NP90 201 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 ZFP57Q9NU63 452 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 CALYQ9NYX4 217 aa13.04□□□□□ -0.32
FOXRED1-201ENST00000263578 PPIAL4EA0A075B759 164 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 PPIAL4DF5H284 164 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 PPIAL4FP0DN26 164 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 VDAC1P21796 283 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 LTC4SQ16873 150 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 SWI5Q1ZZU3 235 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 NMSQ5H8A3 153 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 ZNF808Q8N4W9 903 aaPredicted RBP13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 GALNT11Q8NCW6 608 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 OR4D5Q8NGN0 318 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 GNG12Q9UBI6 72 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 RNF150Q9ULK6 438 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 PPIAL4AQ9Y536 164 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 TRGV10A0A0A0MS01 117 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 MSGN1A6NI15 193 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 K7EPK0 472 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 F2RL2O00254 374 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 TMPRSS2O15393 492 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 ADAM20O43506 726 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 SPDEFO95238 335 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 GNLYP22749 145 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 FAM71E2Q8N5Q1 922 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 FAM216AQ8WUB2 273 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 EDARADDQ8WWZ3 215 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
FOXRED1-201ENST00000263578 CLDN14O95500 239 aa13.02□□□□□ -0.32
FOXRED1-201ENST00000263578 ZNF16P17020 682 aaPredicted RBP13.02□□□□□ -0.32
FOXRED1-201ENST00000263578 ST8SIA2Q92186 375 aa13.02□□□□□ -0.32
FOXRED1-201ENST00000263578 C5orf30Q96GV9 206 aa13.02□□□□□ -0.32
FOXRED1-201ENST00000263578 ZNF471Q9BX82 626 aaPredicted RBP13.02□□□□□ -0.32
FOXRED1-201ENST00000263578 ACACBO00763 2458 aa13.02□□□□□ -0.33
FOXRED1-201ENST00000263578 IGHV1-69-2A0A0G2JMI3 117 aa13.01□□□□□ -0.33
FOXRED1-201ENST00000263578 CLEC18AA5D8T8 446 aa13.01□□□□□ -0.33
FOXRED1-201ENST00000263578 ZG16O60844 167 aa13.01□□□□□ -0.33
FOXRED1-201ENST00000263578 CGB3P0DN86 165 aa13.01□□□□□ -0.33
FOXRED1-201ENST00000263578 CGB7P0DN87 165 aa13.01□□□□□ -0.33
FOXRED1-201ENST00000263578 ALKAL2Q6UX46 152 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms