RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 TP53RKQ96S44 253 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 HBZP02008 142 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 CDX1P47902 265 aaPredicted RBP12.92□□□□□ -0.34
CCDC6-201ENST00000263102 ZNF415Q09FC8 603 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 P2RY6Q15077 328 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 FAM159AQ6UWV7 190 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 BPIFA4PQ86YQ2 179 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 MRPL30Q8TCC3 161 aaKnown RBP12.92□□□□□ -0.34
CCDC6-201ENST00000263102 DDA1Q9BW61 102 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 IDI2-AS1Q9NZ38 188 aa12.92□□□□□ -0.34
CCDC6-201ENST00000263102 FAM209BQ5JX69 171 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 MRM1Q6IN84 353 aaKnown RBP12.91□□□□□ -0.34
CCDC6-201ENST00000263102 SLC17A5Q9NRA2 495 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 MC5RP33032 325 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 CLLU1Q5K131 121 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 DEGS2Q6QHC5 323 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 JMJD8Q96S16 334 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 MRPL13Q9BYD1 178 aaKnown RBP12.91□□□□□ -0.34
CCDC6-201ENST00000263102 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 A0A1W2PQD3 144 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 NKX2-6A6NCS4 301 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 FXYD3Q14802 87 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 ST3GAL2Q16842 350 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 YIPF6Q96EC8 236 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 Q9N2K0 584 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 FOXJ2Q9P0K8 574 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 SOX21Q9Y651 276 aaPredicted RBP12.91□□□□□ -0.34
CCDC6-201ENST00000263102 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 ACSF3Q4G176 576 aaPredicted RBP12.91□□□□□ -0.34
CCDC6-201ENST00000263102 PHYHIPLQ96FC7 376 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 CHRNA10Q9GZZ6 450 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 RCC2Q9P258 522 aaKnown RBP12.91□□□□□ -0.34
CCDC6-201ENST00000263102 TMEM238LA0A1B0GVL6 79 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 A6NJY4 79 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 KBTBD11O94819 623 aa12.91□□□□□ -0.34
CCDC6-201ENST00000263102 PEAR1Q5VY43 1037 aaPredicted RBP12.91□□□□□ -0.34
CCDC6-201ENST00000263102 RBFOX3A6NFN3 312 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 NDUFB6O95139 128 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 HPRT1P00492 218 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 CTSDP07339 412 aaPredicted RBP12.9□□□□□ -0.34
CCDC6-201ENST00000263102 SLC16A13Q7RTY0 426 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 WDFY1Q8IWB7 410 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 ASB13Q8WXK3 278 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 PGLYRP3Q96LB9 341 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 SLC35B3Q9H1N7 401 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 SLC6A13Q9NSD5 602 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 CALYQ9NYX4 217 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 ADAT3Q96EY9 351 aaPredicted RBP12.9□□□□□ -0.34
CCDC6-201ENST00000263102 ZFP30Q9Y2G7 519 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 LIPFP07098 398 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 IL11P20809 199 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 MRM2Q9UI43 246 aaKnown RBP12.9□□□□□ -0.34
CCDC6-201ENST00000263102 TMEM50BP56557 158 aa12.9□□□□□ -0.34
CCDC6-201ENST00000263102 PRR32B1ATL7 298 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 MGST3O14880 152 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 RBFOX2O43251 390 aaKnown RBP eCLIP12.89□□□□□ -0.353e-6■□□□□ 10.3
CCDC6-201ENST00000263102 LINC00869P0C866 280 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 PGLYRP4Q96LB8 373 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 IL20Q9NYY1 176 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 TRAV8-7A0A075B6U6 113 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 TCRBV4S1A1TA0A5B7 111 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 PSCAO43653 123 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 RND2P52198 227 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 PSG9Q00887 426 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 GTSCR1Q86UQ5 136 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 GCSAMQ8N6F7 178 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 OR2T10Q8NGZ9 312 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 SSBP3Q9BWW4 388 aaPredicted RBP12.89□□□□□ -0.35
CCDC6-201ENST00000263102 IGKV3D-20A0A0C4DH25 116 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 A0A0J9YW62 118 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 SLC35E3Q7Z769 313 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 LINC00596Q86U02 117 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 TNFRSF18Q9Y5U5 241 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 OR2A4O95047 310 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 IGHV3-48P01763 117 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 ACAA1P09110 424 aaPredicted RBP12.89□□□□□ -0.35
CCDC6-201ENST00000263102 RPL8P62917 257 aaKnown RBP12.89□□□□□ -0.35
CCDC6-201ENST00000263102 C12orf73Q69YU5 71 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 DPPA3Q6W0C5 159 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 GALNT14Q96FL9 552 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 OR2A7Q96R45 310 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 TBL2Q9Y4P3 447 aaKnown RBP12.89□□□□□ -0.35
CCDC6-201ENST00000263102 FOXI3A8MTJ6 420 aaPredicted RBP12.89□□□□□ -0.35
CCDC6-201ENST00000263102 M0R143 59 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 IGHV3-11P01762 117 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 CRPP02741 224 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 STHQ8IWL8 128 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 RGP1Q92546 391 aaPredicted RBP12.89□□□□□ -0.35
CCDC6-201ENST00000263102 WNT2BQ93097 391 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 ANAPC16Q96DE5 110 aa12.89□□□□□ -0.35
CCDC6-201ENST00000263102 ALKBH7Q9BT30 221 aaPredicted RBP12.89□□□□□ -0.35
CCDC6-201ENST00000263102 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 A6NDN8 102 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 OR2H2O95918 312 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 P2RY1P47900 373 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 ATG4DQ86TL0 474 aaPredicted RBP12.88□□□□□ -0.35
CCDC6-201ENST00000263102 MRPL24Q96A35 216 aaKnown RBP12.88□□□□□ -0.35
CCDC6-201ENST00000263102 CLEC7AQ9BXN2 247 aa12.88□□□□□ -0.35
CCDC6-201ENST00000263102 LOC101059948A0A1B0GTJ6 334 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms