RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DEFB123Q8N688 67 aa10.48□□□□□ -0.73
SMG6-201ENST00000263073 NUDT16L1Q9BRJ7 211 aaKnown RBP10.48□□□□□ -0.73
SMG6-201ENST00000263073 MRPS18AQ9NVS2 196 aaKnown RBP10.48□□□□□ -0.73
SMG6-201ENST00000263073 ADAMTSL1Q8N6G6 1762 aa10.48□□□□□ -0.73
SMG6-201ENST00000263073 CLDN18P56856 261 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 RBM11P57052 281 aaKnown RBP10.47□□□□□ -0.73
SMG6-201ENST00000263073 RND3P61587 244 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 NHLRC3Q5JS37 347 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 DGAT2L7PQ6IED9 249 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 PQLC2Q6ZP29 291 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 IP6K3Q96PC2 410 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 RBKSQ9H477 322 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 LPAR2Q9HBW0 351 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 J3QR06 171 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 WISP3O95389 354 aaPredicted RBP10.47□□□□□ -0.73
SMG6-201ENST00000263073 CDS2O95674 445 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 PLP1P60201 277 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 MIC13Q5XKP0 118 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 SPEM1Q8N4L4 309 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 OR8G5Q8NG78 346 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 ADAMTS17Q8TE56 1095 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 HIST1H2BAQ96A08 127 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 IGKV1-8A0A0C4DH67 115 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 PIN1P1O15428 100 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 IGHV3-48P01763 117 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 SSTR5P35346 364 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 LSM6P62312 80 aaKnown RBP10.47□□□□□ -0.73
SMG6-201ENST00000263073 BHLHA15Q7RTS1 189 aaPredicted RBP10.47□□□□□ -0.73
SMG6-201ENST00000263073 PAXXQ9BUH6 204 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 SYNGR1O43759 233 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 SPEM2Q0P670 501 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 H1FOOQ8IZA3 346 aaPredicted RBP10.47□□□□□ -0.73
SMG6-201ENST00000263073 OR1N2Q8NGR9 330 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 SAP30LQ9HAJ7 183 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 TMEM38BQ9NVV0 291 aa10.47□□□□□ -0.73
SMG6-201ENST00000263073 YBX2Q9Y2T7 364 aaKnown RBP10.47□□□□□ -0.73
SMG6-201ENST00000263073 UBR3Q6ZT12 1888 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 GFRA1P56159 465 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 ECSCRQ19T08 205 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 OR8B3Q8NGG8 313 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 SNAI2O43623 268 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 DLX1P56177 255 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 ERVFRD-1P60508 538 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 IBA57Q5T440 356 aaKnown RBP10.46□□□□□ -0.73
SMG6-201ENST00000263073 ATRAIDQ6UW56 229 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 MDP1Q86V88 176 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 DOLPP1Q86YN1 238 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 LEAP2Q969E1 77 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 IER2Q9BTL4 223 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 CLEC1BQ9P126 229 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 LOC105371267A0A1B0GV96 52 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 MKRN2OSH3BPM6 223 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 HIST1H1EP10412 219 aaKnown RBP10.46□□□□□ -0.73
SMG6-201ENST00000263073 GGTLC2Q14390 218 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 PTX4Q96A99 478 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 SDHCQ99643 169 aaPredicted RBP10.46□□□□□ -0.73
SMG6-201ENST00000263073 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.73
SMG6-201ENST00000263073 FOCADQ5VW36 1801 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 IGKV3D-15A0A087WSY6 115 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 CLDN14O95500 239 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 IGKV3-15P01624 115 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 HCP5Q6MZN7 132 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 VKORC1L1Q8N0U8 176 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 CARFQ8N187 725 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 SNRNP40Q96DI7 357 aaKnown RBP10.46□□□□□ -0.74
SMG6-201ENST00000263073 PERPQ96FX8 193 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 LIMS1P48059 325 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 SPRED2Q7Z698 418 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 DEFB124Q8NES8 71 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 ZNF721Q8TF20 911 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 C5orf66Q9H5L9 145 aa10.46□□□□□ -0.74
SMG6-201ENST00000263073 SSPNQ14714 243 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 SNAI3Q3KNW1 292 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 ZNF826PQ6ZT77 177 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 ST6GALNAC6Q969X2 333 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 PARLQ9H300 379 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 PIPOXQ9P0Z9 390 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 ZNFX1Q9P2E3 1918 aaKnown RBP10.45□□□□□ -0.74
SMG6-201ENST00000263073 CTSBP07858 339 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 ZP1P60852 638 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 IL11RAQ14626 422 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 C2orf68Q2NKX9 166 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 MIA3Q5JRA6 1907 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 A0A1W2PQD3 144 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 C4orf51C9J302 202 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 M0R296 226 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 LHX9Q9NQ69 397 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 GPR132Q9UNW8 380 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 FOXS1O43638 330 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 KLF7O75840 302 aaPredicted RBP10.45□□□□□ -0.74
SMG6-201ENST00000263073 SRP14P37108 136 aaKnown RBP10.45□□□□□ -0.74
SMG6-201ENST00000263073 GAB4Q2WGN9 574 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 SPANXN1Q5VSR9 72 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 RBPMS2Q6ZRY4 209 aaKnown RBP10.45□□□□□ -0.74
SMG6-201ENST00000263073 SHANK3Q9BYB0 1731 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 WNT10AQ9GZT5 417 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 ZFP30Q9Y2G7 519 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 ASAH2BP0C7U1 165 aa10.45□□□□□ -0.74
SMG6-201ENST00000263073 SRIP30626 198 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms