RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MPV17LQ2QL34 196 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 FAM90A2PQ658T7 463 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 MKXQ8IYA7 352 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 OR5C1Q8NGR4 320 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 OR5P3Q8WZ94 311 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 C12orf49Q9H741 205 aa19.21■□□□□ 0.67
MCF2L-201ENST00000261963 PLP2Q04941 152 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 HNF4GQ14541 408 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 ATP1A1-AS1Q5TC04 95 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 DPPA3Q6W0C5 159 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 ZNF488Q96MN9 340 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 TMEM222Q9H0R3 208 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 IGKV1-6A0A0C4DH72 117 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 HES3Q5TGS1 186 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 ZNF880Q6PDB4 577 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-201ENST00000261963 FAM185AQ8N0U4 392 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 TMEM252Q8N6L7 170 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 SNHG12Q9BXW3 62 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 HIPK2Q9H2X6 1198 aa19.2■□□□□ 0.66
MCF2L-201ENST00000261963 IGKV1D-13A0A0B4J2D9 117 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 KLRC4-KLRK1H3BQV0 150 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 TK1P04183 234 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 IGKV1-13P0DP09 117 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 NKX2-1P43699 371 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-201ENST00000261963 TBC1D26Q86UD7 250 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 SRD5A3Q9H8P0 318 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 LYRM2Q9NU23 88 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-201ENST00000261963 GNG13Q9P2W3 67 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 NKX2-6A6NCS4 301 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 C3orf80F5H4A9 247 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 TUSC2O75896 110 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 CDS2O95674 445 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 VAMP2P63027 116 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 COL10A1Q03692 680 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 ZNF818PQ6ZRF7 136 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 HIST1H2AAQ96QV6 131 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 CTDSP1Q9GZU7 261 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 DEFB127Q9H1M4 99 aa19.19■□□□□ 0.66
MCF2L-201ENST00000261963 SLC22A20A6NK97 555 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 TRDCB7Z8K6 153 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 DYNLT3P51808 116 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 RUNX1Q01196 453 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 RNFT1Q5M7Z0 435 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 SUMF1Q8NBK3 374 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 OR1K1Q8NGR3 316 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 FER1L6-AS2Q96M78 137 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 TMEM56Q96MV1 263 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 GPHA2Q96T91 129 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 OR51B6Q9H340 312 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 TMEM56-RWDD3S4R434 201 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 URB1O60287 2271 aaKnown RBP19.18■□□□□ 0.66
MCF2L-201ENST00000261963 FRYQ5TBA9 3013 aa19.18■□□□□ 0.66
MCF2L-201ENST00000261963 PROB1E7EW31 1015 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 CEACAM1P13688 526 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 GAPTQ8N292 157 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 BCL2L2Q92843 193 aaPredicted RBP19.17■□□□□ 0.66
MCF2L-201ENST00000261963 WDYHV1Q96HA8 205 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 SDF2L1Q9HCN8 221 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 GLRX2Q9NS18 164 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 SPRR3Q9UBC9 169 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 XKRY2A2RUG3 117 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 M0R143 59 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 SSSCA1O60232 199 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 CLN3Q13286 438 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 COA6Q5JTJ3 125 aaKnown RBP19.17■□□□□ 0.66
MCF2L-201ENST00000261963 C20orf204Q6ZNR8 217 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 NEK7Q8TDX7 302 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 CBY1Q9Y3M2 126 aa19.17■□□□□ 0.66
MCF2L-201ENST00000261963 MBP02144 154 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 EPHA1P21709 976 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 SRPXP78539 464 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 IGFBP7Q16270 282 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 SPIN3Q5JUX0 258 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 CISD1Q9NZ45 108 aaKnown RBP19.16■□□□□ 0.66
MCF2L-201ENST00000261963 VAX2Q9UIW0 290 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 ATP23Q9Y6H3 246 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 R4GN57 208 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 ARHGAP21Q5T5U3 1957 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 TRAV1-1A0A0B4J248 108 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 ANKRD30BLA7E2S9 258 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 CST7O76096 145 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 ZNF25P17030 456 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-201ENST00000261963 MDP1Q86V88 176 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 SELENOHQ8IZQ5 122 aaKnown RBP19.16■□□□□ 0.66
MCF2L-201ENST00000261963 MRPL30Q8TCC3 161 aaKnown RBP19.16■□□□□ 0.66
MCF2L-201ENST00000261963 UBE2J1Q9Y385 318 aaPredicted RBP19.16■□□□□ 0.66
MCF2L-201ENST00000261963 MPC1Q9Y5U8 109 aa19.16■□□□□ 0.66
MCF2L-201ENST00000261963 KIR2DS1A0A191URI9 304 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 KIR2DS4P43632 304 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 KIR2DS1Q14954 304 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 C17orf78Q8N4C9 275 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 IL22RA1Q8N6P7 574 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 R3HDM4Q96D70 268 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 GAB2Q9UQC2 676 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 TRAV24A0A0B4J272 114 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 MARCH11A6NNE9 402 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 CD46P15529 392 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 FBXW9Q5XUX1 488 aa19.15■□□□□ 0.66
MCF2L-201ENST00000261963 TMEM217Q8N7C4 229 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms